PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KFK30297.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
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Family | BES1 | ||||||||
Protein Properties | Length: 314aa MW: 34190.1 Da PI: 8.3231 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 212.6 | 1e-65 | 13 | 153 | 2 | 145 |
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslks 100 +sgr+ptwkErEnnk+RERrRRai+akiy+GLRaqGnyklpk++DnneVlkALc eAGw+ve+DGttyrkg+kpl +e+ + ++ s++ss+q s++s KFK30297.1 13 SSGRTPTWKERENNKKRERRRRAITAKIYSGLRAQGNYKLPKHCDNNEVLKALCIEAGWIVEEDGTTYRKGFKPL-VSEMSITPNNFSTNSSIQPSPQS 110 89*************************************************************************.889999999************** PP DUF822 101 salaspvesysaspksssfpspssldsislasaasllpvlsvlsl 145 s+++sp++sy+ sp+sssfpsps+++ ++++ llp+l++ ++ KFK30297.1 111 STFPSPAPSYHGSPTSSSFPSPSRYEGNPSS--YLLLPFLHNIAS 153 ***************************9887..899999988765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 6.9E-61 | 13 | 136 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
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Protein Sequence Length: 314 aa Download sequence Send to blast |
MAAGDIGIGG GSSSGRTPTW KERENNKKRE RRRRAITAKI YSGLRAQGNY KLPKHCDNNE 60 VLKALCIEAG WIVEEDGTTY RKGFKPLVSE MSITPNNFST NSSIQPSPQS STFPSPAPSY 120 HGSPTSSSFP SPSRYEGNPS SYLLLPFLHN IASSIPANLP PLRISNSAPV TPPLSSPTSR 180 GSKRKLSVEQ LPNGGLRHPL FAISAPSSPT RRAGHQTPPT IPECDESEED SFEDSGRWIN 240 FQTTAPTSPT FNLVQQTSMA IDIKRSDWGL SGMNGRGSEF EFENGTVKPW EGEMIHEVGV 300 EDLELTLGGT KTRC |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 7e-27 | 16 | 94 | 372 | 450 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 7e-27 | 16 | 94 | 372 | 450 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 7e-27 | 16 | 94 | 372 | 450 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 7e-27 | 16 | 94 | 372 | 450 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
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Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00474 | DAP | Transfer from AT4G36780 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KFK30297.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006411962.1 | 1e-180 | BES1/BZR1 homolog protein 2 | ||||
Swissprot | Q94A43 | 1e-179 | BEH2_ARATH; BES1/BZR1 homolog protein 2 | ||||
TrEMBL | A0A087GK95 | 0.0 | A0A087GK95_ARAAL; Uncharacterized protein | ||||
STRING | A0A087GK95 | 0.0 | (Arabis alpina) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM11512 | 23 | 33 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36780.1 | 7e-83 | BES1/BZR1 homolog 2 |