PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KFK30194.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
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Family | Nin-like | ||||||||
Protein Properties | Length: 233aa MW: 27036.1 Da PI: 10.231 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 82.7 | 3.6e-26 | 97 | 146 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 + +sledlskyF pi +A++ L+++lTvLK++CR++GI+RWPhRkiksl KFK30194.1 97 AGLSLEDLSKYFGVPIVEASRRLNIGLTVLKKKCREFGIPRWPHRKIKSL 146 5699********************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 19.179 | 81 | 166 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 7.8E-22 | 99 | 146 | IPR003035 | RWP-RK domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence Send to blast |
NDLKFISDLK LKKVLKVSDQ ENCSRIRHCN FEVDRVQDCE VDQPKPRKIV LKQDLNRLPD 60 SETEAEESEK DKTEHSESDA KTETMKKQKR TPSEHVAGLS LEDLSKYFGV PIVEASRRLN 120 IGLTVLKKKC REFGIPRWPH RKIKSLDTLI HDLQGEAEKQ KNEAAALAVA KRQKKLETEK 180 INMVKRPFME IQIETKKFRQ DNFKKRHKAS RAKKNQESLV TSSSTFKILD LLT |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KFK30194.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006412085.1 | 1e-114 | protein RKD5 | ||||
Swissprot | O81791 | 1e-103 | RKD5_ARATH; Protein RKD5 | ||||
TrEMBL | A0A087GJZ2 | 1e-168 | A0A087GJZ2_ARAAL; Uncharacterized protein (Fragment) | ||||
STRING | A0A087GJZ2 | 1e-169 | (Arabis alpina) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM12049 | 24 | 29 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35590.1 | 1e-102 | RWP-RK domain-containing protein |
Publications ? help Back to Top | |||
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