PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK24631.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family bHLH
Protein Properties Length: 175aa    MW: 19913 Da    PI: 5.2377
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK24631.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.92.1e-094989954
                HHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH  9 ErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                 r RR+ri ++f  L++++P  a      K++ +++L +A+ Y+k L
  KFK24631.1 49 ARERRHRISDRFKILQSMVPGgA------KMDTVSMLDEAISYVKFL 89
                699*****************966......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.1734089IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.72E-1445104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.20E-124693No hitNo description
SMARTSM003533.1E-124695IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.2E-124693IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.1E-74989IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    Send to blast
MDHFSFSSQN PSSPSTTSSS SSFHGHKDKT EKTKRSTSTL STDPQSVAAR ERRHRISDRF  60
KILQSMVPGG AKMDTVSMLD EAISYVKFLK AQIWFHQNML LFLNDQETTS SCTYSPVGVG  120
EFEPSFFGCD HEDYVPVTET YSQDMPLMFT DSEYSMWFGS VDNEQEETMH RRGLS
Cis-element ? help Back to Top
SourceLink
PlantRegMapKFK24631.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023637638.11e-82transcription factor bHLH140
SwissprotQ9M0413e-74BH140_ARATH; Transcription factor bHLH140
TrEMBLA0A087G4291e-128A0A087G429_ARAAL; Uncharacterized protein
STRINGA0A087G4291e-128(Arabis alpina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM152901418
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01310.11e-72APRATAXIN-like
Publications ? help Back to Top
  1. Heyndrickx KS,Vandepoele K
    Systematic identification of functional plant modules through the integration of complementary data sources.
    Plant Physiol., 2012. 159(3): p. 884-901
    [PMID:22589469]