 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
orange1.1g038451m |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
| Family |
bHLH |
| Protein Properties |
Length: 527aa MW: 57172.7 Da PI: 9.3537 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| orange1.1g038451m | genome | ICGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 55.9 | 7.5e-18 | 221 | 270 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
r +h++ E+rRR++iN++f+ Lrel+P++ ++K +Ka+ L +++eYI+ Lq
orange1.1g038451m 221 RSKHSATEQRRRSKINDRFQMLRELIPHS----DQKRDKASFLLEVIEYIQFLQ 270
889*************************9....9*******************9 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006351 | Biological Process | transcription, DNA-templated |
| GO:0009742 | Biological Process | brassinosteroid mediated signaling pathway |
| GO:1902448 | Biological Process | positive regulation of shade avoidance |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 527 aa
Download sequence Send
to blast |
GFLKTHDFLQ VGKINAKEES TLEITSIVEK PPPPAPPPPS SSSVEHNLPG GIGTYSISHV 60
SYFGQKVPKP EGSLFAVAQT SSTEKNDENS NCSSYTGSGF TLWEESAVKK GKTGKENAGE 120
RAIGRGEATV NVGQWVSQSS STNNSHRNSF SSLSCSQPLG MKSQSFMEMI KSAKGSTHDD 180
DLDDADEFIL KRENSTTTNH KGDLRVKVEG KSNDQKPNTP RSKHSATEQR RRSKINDRFQ 240
MLRELIPHSD QKRDKASFLL EVIEYIQFLQ EKVHKYEGPY VGWNPERAKL APWKNNHKHA 300
ESYVDQSQGI NNGSATALVF AAKFNEKNVS ISPAIPGSAQ KPVESDMTSA STFKTMDPQP 360
GITNKAMPFP MSLQPNCYKP VRNGGAAASL RPRLASDAEN TTSQPQTLEC HTRSCTGDMP 420
MSNNKKLKEQ ELTVEGGRIN ISTAYSQGLL KTLTQALQSS GVDLSQASVS VQIDLGKRAT 480
QAPITLASNL KGNEVPASNQ GTTGSRDRNG GEGSNQALKK QKIDKC*
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed constitutively in roots. {ECO:0000269|PubMed:12679534}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Positive brassinosteroid-signaling protein. Transcription factor that bind specifically to the DNA sequence 5'-CANNTG-3'(E box). Can bind individually to the promoter as a homodimer or synergistically as a heterodimer with BZR2/BES1. Does not itself activate transcription but enhances BZR2/BES1-mediated target gene activation. {ECO:0000269|PubMed:15680330}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by cold treatment. {ECO:0000269|PubMed:12679534}. |
