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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
orange1.1g037856m |
Common Name | CISIN_1g037856mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
bHLH |
Protein Properties |
Length: 257aa MW: 29093.8 Da PI: 7.0999 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
orange1.1g037856m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 17.2 | 9e-06 | 144 | 183 | 11 | 55 |
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
rR +++ +++ L++l+ + +K + a++L++A YIk Lq
orange1.1g037856m 144 RRSQKLSDKITALQKLVSPY-----GKTDTASVLQEASLYIKLLQ 183
7999**************99.....9****************998 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 257 aa
Download sequence Send
to blast |
TNVHRNDFLM DSKLSKDDNQ LRDGGFAISY QSLVNCQQGI QSITTSCDNV SPQSFLLSRM 60 RSLPQFDVDF ESQQNERTHA IEATDLLPQE GVCANLALNK AALKVSKKIN NKKKTKLNSF 120 CEEQWRHQVN DTTTRIQEHR VPVRRSQKLS DKITALQKLV SPYGKTDTAS VLQEASLYIK 180 LLQEQIQNLF QMLSGSYNSL QVQVQVLHSL EMGEEQLDLR SRGLCLVPIS FSQKVTQEDL 240 LESHSTSRNT MVDTEF*
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