PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID orange1.1g037676m
Common NameCISIN_1g037676mg
Organism
Citrus sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bZIP
Protein Properties Length: 268aa    MW: 29647.5 Da    PI: 7.4097
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
orange1.1g037676mgenomeICGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.92.9e-15201251555
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                        +r+rr++kNRe+A rsR+RK+a++ eLe +  +L+aeN++Lk+ ++el+ +
  orange1.1g037676m 201 RRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERK 251
                        69*********************************************9865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.0E-11197261IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.634199251IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.13E-11201251No hitNo description
Gene3DG3DSA:1.20.5.1703.0E-14201251No hitNo description
CDDcd147074.77E-23201248No hitNo description
PfamPF001701.1E-12201251IPR004827Basic-leucine zipper domain
PROSITE patternPS000360204219IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MGNKLVVETA EQAATLTRQN SFSIPILLCK KTVEEVWSEI QKDQQPQRRC HVEPPQRQPT  60
FGEITLEEFL VKAGVVQEPA TKPCPQSHSP PIHRSNNDSN NNNNTCLGSA YGMGLGPSAC  120
TMMALGFSAT QPSMGSNLLV NGYAAYPIYT APTELVGQLA STDSNNGDDK EKSQGMMLEA  180
VGPKGNRKRI IDGPHEVVVE RRQRRMIKNR ESAARSRARK QAYTVELELE LTQLKAENDK  240
LKEAVKELER KRVQEDIQAT EDGKKED*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Csi.85080.0callus
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024035011.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 1 isoform X5
TrEMBLA0A067F3K20.0A0A067F3K2_CITSI; Uncharacterized protein
STRINGXP_006487955.10.0(Citrus sinensis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM116522230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36270.15e-43bZIP family protein