 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
orange1.1g037119m |
Common Name | CISIN_1g037119mg |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
Family |
ERF |
Protein Properties |
Length: 268aa MW: 29146.9 Da PI: 8.6982 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
orange1.1g037119m | genome | ICGC | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 64 | 3.1e-20 | 29 | 79 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
++ GVr+++ +grWvAeI+d s +r r +lg+++t+eeAa+a+++a+++l+ge
orange1.1g037119m 29 RFVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDTPEEAARAYDEAARALRGE 79
589******.7*********43...36**************************97 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 268 aa
Download sequence Send
to blast |
MAAGSETSKN PTTTNSKGGQ ATTKPAARRF VGVRQRPSGR WVAEIKDSSQ RVRLWLGTYD 60 TPEEAARAYD EAARALRGEN ARTNFASSAV NNNNNPLNHS DSGNSSPCVN GRFVAQSDGR 120 NGLSFSSLKA KLSKNLQSIM ARTSENNKKS TKSRVSDHFT FASIFHFRSY QYQTPVDLKN 180 IEKVVQPSII VPQAADHMHD PSSWESSSTV SDGSSTEWGG FRQHGLDSDG LDSDIGEVVV 240 DPTMGWIDSP ENIGACTSEI EASRSRSK
|