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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
orange1.1g030782m |
Common Name | CISIN_1g023847mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
bHLH |
Protein Properties |
Length: 172aa MW: 18878.2 Da PI: 8.476 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
orange1.1g030782m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 34.4 | 4.1e-11 | 52 | 99 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR++i +++ L++l+P + +k Ka +L + ++YI+sLq
orange1.1g030782m 52 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 99
8*************************9....677*****************9 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 172 aa
Download sequence Send
to blast |
MKTSGSKNEN GSKAEVEASS AAGNKPAESS KPSEPPKDYI HVRARRGQAT DSHSLAERAR 60 REKISERMKI LQDLVPGCNK VIGKALVLDE IINYIQSLQR QVEFLSMKLE AVNSRMNLTP 120 TIEGFHPKDL GEQAFDATGM IFGSQTAREY AQGSQQDWLH MQVGGSFERA T*
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Expression -- UniGene
? help Back to Top |
UniGene ID |
E-value |
Expressed in |
Csi.887 | 9e-85 | callus| flower| fruit| vegetative meristem |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}. |