PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID orange1.1g027627m
Common NameCISIN_1g027627mg
Organism
Citrus sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bZIP
Protein Properties Length: 222aa    MW: 24172 Da    PI: 9.6989
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
orange1.1g027627mgenomeICGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_126.41.5e-08188210426
                        XCHHHCHHHHHHHHHHHHHHHHH CS
             bZIP_1   4 lkrerrkqkNReAArrsRqRKka 26 
                        ++r +r++kNRe+A rsR+RK++
  orange1.1g027627m 188 DRRHKRMMKNRESAARSRARKQE 210
                        789*******************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd147071.65E-13189210No hitNo description
Gene3DG3DSA:1.20.5.1704.3E-5189210No hitNo description
PROSITE patternPS000360192207IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MWPSPARNNK NGISSSISKS SSSCSSPSSP GTPNKKSMEE VWQDISLTSL QDHANTAIPN  60
TTGIPNTSAA LIFQDFFARP FNKDPPITKA SAAAHPSTAE PSNSSCFGNL APHHGGALLS  120
LNSGSGFNYL ENVPAPLAHH HQRPSHQLLQ GFPLNNCNSP FDDALAPAHV VSSICFKRPQ  180
EHEGHLTDRR HKRMMKNRES AARSRARKQE PHFLFFPPLF Y*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006435229.21e-151bZIP transcription factor 27
TrEMBLA0A067HAU61e-160A0A067HAU6_CITSI; Uncharacterized protein
STRINGXP_006435229.11e-133(Citrus clementina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19342772
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.11e-12bZIP family protein