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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
orange1.1g026943m |
Common Name | CISIN_1g026943mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
bHLH |
Protein Properties |
Length: 231aa MW: 25735.5 Da PI: 10.29 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
orange1.1g026943m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 49.4 | 8.2e-16 | 53 | 99 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
hn+ ErrRRdriN+++ L++l+P+a K +Ka++L ++++Y+k+L+
orange1.1g026943m 53 VHNQSERRRRDRINQKMKALQKLVPNA-----SKTDKASMLDEVIDYLKQLK 99
5*************************9.....7*****************95 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 231 aa
Download sequence Send
to blast |
MMTWASYESL KSLKTKTTDE DSASHGRSEN QDEDHETKTG RSHSSKRRRT AAVHNQSERR 60 RRDRINQKMK ALQKLVPNAS KTDKASMLDE VIDYLKQLKA QVQMMNNVRN NMPQMNMMMP 120 LGMQQQLQMS LLARMGMGVG LGTGMGMLDM NTMAAAAATA RTAPQSLPPP IYSPAASVTL 180 PDPYYAFLAQ SMNVELYNKM AALFRQQVKQ NTIQQAACSP SMQSNHMQGD *
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 46 | 61 | RRRTAAVHNQSERRRR |
2 | 57 | 62 | ERRRRD |
Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in stems and flowers. {ECO:0000269|PubMed:12679534}. |
Functional Description ? help
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Source |
Description |
UniProt | Required during the fertilization of ovules by pollen. {ECO:0000269|PubMed:15634699}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By cold treatment. {ECO:0000269|PubMed:12679534}. |