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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
orange1.1g020922m |
| Common Name | CISIN_1g020801mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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| Family |
ERF |
| Protein Properties |
Length: 321aa MW: 35353.2 Da PI: 7.1642 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| orange1.1g020922m | genome | ICGC | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 65.2 | 1.4e-20 | 134 | 183 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr ++ +g+W+AeIrd + + +r++lg+f+tae+Aa+a+++a+++++g
orange1.1g020922m 134 RYRGVRHRP-WGKWAAEIRDpF-----KaARVWLGTFDTAEDAARAYDEAALRFRG 183
7*****888.**********66.....56*************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 321 aa
Download sequence Send
to blast |
MRWKEWEMSA MVSALKHVVA GDTDVVVSQA QQMQQNDYNM KVTAVTSSVG NSSSSSSWAG 60
SGQKRAREME GGDNFSSRPE REVDELSHVT AGSVFVVTGT ERLSISASTR MQGEAIYEYN 120
SNKKSVRVQE PGRRYRGVRH RPWGKWAAEI RDPFKAARVW LGTFDTAEDA ARAYDEAALR 180
FRGNKAKLNF PENVKLAKSS PNANSVAAQL TISDSTTTLL PISTPSEPIV HCQALDHYVP 240
NTEVSSDFRD YSFLVSDFAE FQRQPMSSYL SSASSPLRLT SSHPFPGQPP VQFMPAKTES 300
DSAEFSIPPW NASSYYPPSG *
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Ubiquitous with lower levels in seeds and siliques. {ECO:0000269|PubMed:16227468}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Negative regulator of the abscisic acid (ABA) signaling pathway involved in seed germination and in responses to stress conditions. Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:16227468}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By abscisic acid (ABA) and stresses, including cold, drought and salt (PubMed:16227468, PubMed:26961720). Triggered by YY1 (PubMed:26961720). {ECO:0000269|PubMed:16227468, ECO:0000269|PubMed:26961720}. |
| Publications
? help Back to Top |
- Choi DS,Hwang BK
Proteomics and functional analyses of pepper abscisic acid-responsive 1 (ABR1), which is involved in cell death and defense signaling.
Plant Cell, 2011. 23(2): p. 823-42
[PMID:21335377] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Li T,Wu XY,Li H,Song JH,Liu JY
A Dual-Function Transcription Factor, AtYY1, Is a Novel Negative Regulator of the Arabidopsis ABA Response Network.
Mol Plant, 2016. 9(5): p. 650-661
[PMID:26961720] - Sanyal SK, et al.
Arabidopsis CBL interacting protein kinase 3 interacts with ABR1, an APETALA2 domain transcription factor, to regulate ABA responses.
Plant Sci., 2017. 254: p. 48-59
[PMID:27964784] - Choi SW,Lee SB,Na YJ,Jeung SG,Kim SY
Arabidopsis MAP3K16 and Other Salt-Inducible MAP3Ks Regulate ABA Response Redundantly.
Mol. Cells, 2017. 40(3): p. 230-242
[PMID:28292003]
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