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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
orange1.1g020438m |
Common Name | CISIN_1g020391mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
ERF |
Protein Properties |
Length: 327aa MW: 36371.5 Da PI: 4.5968 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
orange1.1g020438m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 61.9 | 1.4e-19 | 50 | 99 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+G+r+++ +g+W+AeIrdp++ r++lg+f taeeAa+a++a +++++g
orange1.1g020438m 50 QYRGIRQRP-WGKWAAEIRDPTK---GVRVWLGTFNTAEEAARAYDAEARRIRG 99
69*******.**********964...4************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0070483 | Biological Process | detection of hypoxia |
GO:0005634 | Cellular Component | nucleus |
GO:0005886 | Cellular Component | plasma membrane |
GO:0016021 | Cellular Component | integral component of membrane |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 327 aa
Download sequence Send
to blast |
MKFASLYDLV VLLVYEITFF FLFSPIIEGS TAVKHVEQAK KSTERKRKNQ YRGIRQRPWG 60 KWAAEIRDPT KGVRVWLGTF NTAEEAARAY DAEARRIRGK KAKVNFPDET PAAAPKSSVK 120 ANSQKSVPKA CLSPVQPSLN QNFNYLNNSD QDYYNNVSIL EEKPQVNQYG YMGSFPDDGE 180 LGFKPFVPTA DDTPVYFNSD QGSNSFDCSD FGWGEQAPKT PEISSVLEAT PEVDESQFVD 240 AVANPMKKLK SNSENAVPVQ DNNGKSLSDE LLAFDNQVKF LPMPYPEGSW EASLDAFLNG 300 DNTQDGGNLM NLWSFDDFPS TLGGVY*
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Expression -- UniGene
? help Back to Top |
UniGene ID |
E-value |
Expressed in |
Csi.4686 | 0.0 | callus| flower| fruit| root| seed| stem| vegetative meristem |