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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
orange1.1g011736m |
Common Name | CISIN_1g011736mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
GRAS |
Protein Properties |
Length: 479aa MW: 53743.8 Da PI: 6.2056 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
orange1.1g011736m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 463.1 | 1.6e-141 | 49 | 473 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92
l++lL++cA++v++g+ e+a+ L+++s+laspdgd++qR+aayfteALa r+++ +++l kal++++ s + +ee+ ++klf+e++P+lk
orange1.1g011736m 49 LIHLLVACANHVAAGSVENANIGLEQISHLASPDGDTVQRIAAYFTEALADRMLKAWPGLHKALNSTKIS--SITEEIIVQKLFFELCPFLK 138
689*************************************************************999998..59****************** PP
GRAS 93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
+s++++NqaI+ea+ege++vHiiD++ +++QW++Llq+L++Rpegpp+lRiTg+++ +ke le+++ rL++ Ae+l++pf+fn+ +++
orange1.1g011736m 139 LSYVITNQAIVEAMEGEKMVHIIDLNSFEPAQWINLLQTLSARPEGPPHLRITGIHE----QKEVLEQMALRLTEEAEKLDIPFQFNP-IVS 225
*********************************************************....9**************************.799 PP
GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrll.............................................................. 214
+le+++le+L k+gEalaV++vlq+hrll
orange1.1g011736m 226 KLENVDLESL-RKTGEALAVSSVLQMHRLLatddemprrtspsasrtsssshlqrvlhmnrrtlgewlekdsvlmfspspdsasasastpls 316
9*********.589***********************************************************************9966433 PP
GRAS 215 .desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaer 305
+ s + ++L++++slsPkvvvv+eqe++hn++s++er++eal++y+a+fd+le++++r+s er+kvE++l+g+ei+n++aceg er
orange1.1g011736m 317 lAASP----KMGSFLNALWSLSPKVVVVTEQESNHNGPSLMERVMEALNFYAAMFDCLESTMSRASIERQKVEKMLFGEEIKNIIACEGIER 404
33333....5677******************************************************************************* PP
GRAS 306 rerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
rerhe+lekW rle aGF+ +pls++ qa++ll+ ++ dgy+++ee+g+lv++W+drpL+svSaWr
orange1.1g011736m 405 RERHEKLEKWILRLELAGFGRMPLSYHGILQARRLLQSYGYDGYKIKEENGCLVICWQDRPLFSVSAWR 473
********************************************************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 479 aa
Download sequence Send
to blast |
MAGMVQEDGA SSVSSSPLQF FSMMSLSPAF GSPYPWLREL KSEERGLCLI HLLVACANHV 60 AAGSVENANI GLEQISHLAS PDGDTVQRIA AYFTEALADR MLKAWPGLHK ALNSTKISSI 120 TEEIIVQKLF FELCPFLKLS YVITNQAIVE AMEGEKMVHI IDLNSFEPAQ WINLLQTLSA 180 RPEGPPHLRI TGIHEQKEVL EQMALRLTEE AEKLDIPFQF NPIVSKLENV DLESLRKTGE 240 ALAVSSVLQM HRLLATDDEM PRRTSPSASR TSSSSHLQRV LHMNRRTLGE WLEKDSVLMF 300 SPSPDSASAS ASTPLSLAAS PKMGSFLNAL WSLSPKVVVV TEQESNHNGP SLMERVMEAL 360 NFYAAMFDCL ESTMSRASIE RQKVEKMLFG EEIKNIIACE GIERRERHEK LEKWILRLEL 420 AGFGRMPLSY HGILQARRLL QSYGYDGYKI KEENGCLVIC WQDRPLFSVS AWRFRRYD*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in seedlings, root epidermis, leaves, flowers and siliques. {ECO:0000269|PubMed:10341448, ECO:0000269|PubMed:18500650}. |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |