PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

maker-scaffold00982-augustus-gene-0.40-mRNA-1

Organism

Castanea mollissima

Taxonomic ID

60419

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea

Family

BES1

Protein Properties

Length: 321aa MW: 34698.6 Da PI: 8.5945

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
maker-scaffold00982-augustus-gene-0.40-mRNA-1	genome	THGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	227.4	2.8e-70	5	148	1	148
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvved 64 g+sgr ptwkErEnnkrRERrRRaiaakiy+GLRaqGnyklpk++DnneVlkALc eAGwvve+ maker-scaffold00982-augustus-gene-0.40-mRNA-1 5 GSSGRLPTWKERENNKRRERRRRAIAAKIYSGLRAQGNYKLPKHCDNNEVLKALCIEAGWVVEE 68 689*********************************************************** PP DUF822 65 DGttyrkgskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsi 128 DGttyrkg+kp+ ae+ag+s+++s++ss+q+s++ss+++spv+sy+asp+sssfpsp+++d + maker-scaffold00982-augustus-gene-0.40-mRNA-1 69 DGTTYRKGCKPP-PAEMAGTSTNISTCSSVQLSPQSSNFPSPVPSYHASPSSSSFPSPTRFDAN 131 ********.9************************************************ PP DUF822 129 slasaasllpvlsvlslvss 148 +++ llp+l++ ++++ maker-scaffold00982-augustus-gene-0.40-mRNA-1 132 PSS---YLLPFLRNIASIPT 148 985...99999999887665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.1E-64	6	130	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009741	Biological Process	response to brassinosteroid
GO:0005634	Cellular Component	nucleus
GO:0005737	Cellular Component	cytoplasm
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence Send to blast
MAGGGSSGRL PTWKERENNK RRERRRRAIA AKIYSGLRAQ GNYKLPKHCD NNEVLKALCI 60 EAGWVVEEDG TTYRKGCKPP PAEMAGTSTN ISTCSSVQLS PQSSNFPSPV PSYHASPSSS 120 SFPSPTRFDA NPSSYLLPFL RNIASIPTNL PPLRISNSAP VTPPLSSPTS RGSKRKPDWE 180 SLSNGSLNSF RHPLFAASAP SSPTRRHHAT PATIPECDES DASTVDSGRW VSFQTVPPQA 240 APPSPTFNLM KPVAQQSCLQ DGVDVHEGLD WGTAAERGRG TEFEFESGRV KAWEGERIHE 300 VGMEDLELTL GSGKTRGEAS G

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	8e-32	9	89	372	452	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	8e-32	9	89	372	452	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	8e-32	9	89	372	452	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	8e-32	9	89	372	452	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_023881253.1	0.0	BES1/BZR1 homolog protein 2-like
Swissprot	Q94A43	1e-122	BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBL	A9PI05	1e-171	A9PI05_POPTR; BES1 family protein
STRING	XP_009349751.1	1e-174	(Pyrus x bretschneideri)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1275	34	105

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75080.2	1e-104	BES1 family protein