PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00373_0100
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family HD-ZIP
Protein Properties Length: 882aa    MW: 94044.2 Da    PI: 5.7054
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00373_0100genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox51.31.9e-161470557
                   SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
       Homeobox  5 ttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    ++++eql++Le++++++++psa++r+ L k      g++ + +kvWFqNrR +ek+
  kfl00373_0100 14 VKYSSEQLRILEKEYNECPKPSAAKRAALVKDYpalsGIDVKSIKVWFQNRRCREKQ 70
                   6899******************************9********************97 PP
2START117.81.6e-372204193199
                    HHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEE CS
          START   3 aeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmva 96 
                    a+ea qe+++ka+ ++  W++++  + g e+l + + +++ +g a+r++g+v  ++    +ell+dk+ W + ++++e+l   + +  g + l ++
  kfl00373_0100 220 AQEACQEFLAKATGTAVEWTQLPLLKSGAESLGITSIAQGPRGVAARVCGLVSLPAS-KAAELLKDKAAWLRGCRRCEVLGGFTAAgaGRVDLLYT 314
                    78999*********************************999****************.**************************99999******* PP

                    XXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--..-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHH CS
          START  97 elqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe.sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksgla 190
                    +++a+++l+p Rdf +vRy+  l +g  vi+++S+ s++      + +vR+e++  g+l++p+++g++ ++ v+h dl+ +++  +l++l++s+++
  kfl00373_0100 315 QMYAPTTLAPpRDFCTVRYTTVLDDGAIVICERSLASTEASVPaAPAFVRGEVFSGGFLLRPCDGGGCILIAVDHLDLEPWSVLDVLKPLYSSSAV 410
                    ***********************************999887777**************************************************99 PP

                    HHHHHHHHH CS
          START 191 egaktwvat 199
                     +  ++++ 
  kfl00373_0100 411 LAHHDTLSS 419
                    887776665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466896.84E-15673IPR009057Homeodomain-like
SMARTSM003892.7E-12975IPR001356Homeobox domain
PfamPF000465.5E-141470IPR001356Homeobox domain
CDDcd000861.10E-131572No hitNo description
Gene3DG3DSA:1.10.10.603.9E-151570IPR009057Homeodomain-like
PROSITE profilePS5007114.431671IPR001356Homeobox domain
CDDcd146860.0015664101No hitNo description
PROSITE profilePS5084820.168209421IPR002913START domain
Gene3DG3DSA:3.30.530.205.7E-21217395IPR023393START-like domain
SMARTSM002342.0E-24218426IPR002913START domain
SuperFamilySSF559614.73E-27220407No hitNo description
PfamPF018523.2E-34220418IPR002913START domain
PfamPF086703.2E-34737877IPR013978MEKHLA
SuperFamilySSF557851.87E-5775872IPR000014PAS domain
Gene3DG3DSA:3.30.450.209.0E-4777832No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008284Biological Processpositive regulation of cell proliferation
GO:0009733Biological Processresponse to auxin
GO:0010067Biological Processprocambium histogenesis
GO:0010072Biological Processprimary shoot apical meristem specification
GO:0010089Biological Processxylem development
GO:0045597Biological Processpositive regulation of cell differentiation
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0008289Molecular Functionlipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 882 aa     Download sequence    Send to blast
MGGSEETGGG GRYVKYSSEQ LRILEKEYNE CPKPSAAKRA ALVKDYPALS GIDVKSIKVW  60
FQNRRCREKQ RKESSRLVGV NAKLTALNKL LLEENDRLTK QALQLSSENR FLKLRLESMN  120
QALPKLENGA PAPNLSLVLA GPNEDALPDQ IRKLTDAALE QSASLSLPTD DSAGTTINGE  180
GDAAAKGSLL TLGLAHIKPG LAPVAATRTP SNTAGLLQSA QEACQEFLAK ATGTAVEWTQ  240
LPLLKSGAES LGITSIAQGP RGVAARVCGL VSLPASKAAE LLKDKAAWLR GCRRCEVLGG  300
FTAAGAGRVD LLYTQMYAPT TLAPPRDFCT VRYTTVLDDG AIVICERSLA STEASVPAAP  360
AFVRGEVFSG GFLLRPCDGG GCILIAVDHL DLEPWSVLDV LKPLYSSSAV LAHHDTLSSL  420
RFLKRVAMEE GPDSDTGTTH QPAAWRVITE RLARGFNEAV NAFADEQWVS LPSDGMDDVS  480
VMARANSAKD AGAGSGGVLC ARASMLLQIV PPATLVRFMH DHRAEWADPD IDASTAAAIQ  540
GTLRRQRKAG EAGLLPSDIP LAVAMDDQEF LELVKLEGRN SYSKDGDTFL LQLCTCPDVH  600
SAAAAQLVFA PVDAAAAAAD VPLLPSGFRV IPVDTEELKA DGLRGGRAGQ NSLDAHAIDP  660
VGSGDDVTQC WKSVLSIAFQ FAYEPHSEEA VAAVARQYVR SVVGSVQRVA MALAPTCIKA  720
LAPSPRSPPA SPDALLLAKR VVSSYQLHMG GDLCDDKDPS SEAVFKAFWL HPAAILCWVV  780
KASPEYTFAN KAGLDILGTS IHELAGVDWN KSMDEDGRKV VYAASSQVLQ QGYAYLPPGV  840
TLSCKGQSVG YEKALMWKVL DDTGNMLCVA IMYQNWSLLH YQ
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKU8860690.0KU886069.1 Klebsormidium flaccidum class III homeodomain-leucine zipper protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024373357.10.0homeobox-leucine zipper protein HOX32-like isoform X2
TrEMBLA0A173GNX10.0A0A173GNX1_KLEFL; Class III homeodomain-leucine zipper protein
TrEMBLA0A1Y1IAZ90.0A0A1Y1IAZ9_KLENI; Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
STRINGPP1S188_95V6.10.0(Physcomitrella patens)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6511671
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32880.10.0homeobox gene 8