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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
evm_27.model.AmTr_v1.0_scaffold00202.3 |
| Common Name | AMTR_s00202p00017170 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
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| Family |
AP2 |
| Protein Properties |
Length: 418aa MW: 46902.3 Da PI: 7.2363 |
| Description |
AP2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm_27.model.AmTr_v1.0_scaffold00202.3 | genome | TAGP | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 38.4 | 3.1e-12 | 60 | 116 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..krkrfslgkfgtaeeAakaaiaarkkleg 55
s+++GV++++++gr++A+++d s+n k+k + g ++ +e Aa+a++ a++k++g
evm_27.model.AmTr_v1.0_scaffold00202.3 60 SRFRGVSRHRWTGRFEAHLWDkGSWNAsqKKKGKQ-GAYDEEESAARAYDLAALKYWG 116
789******************99889994446666.********************98 PP
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| 2 | AP2 | 50.9 | 3.8e-16 | 159 | 210 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g
evm_27.model.AmTr_v1.0_scaffold00202.3 159 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAAAAYDIAAIEYRG 210
89****99**********99966...3.6*************************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 418 aa
Download sequence Send
to blast |
MAMMVKSEEN HEKRCLGITQ EKKCVKRRRR EHAPLTRSDD NGDSIKEIDQ SSSTAVKRSS 60
RFRGVSRHRW TGRFEAHLWD KGSWNASQKK KGKQGAYDEE ESAARAYDLA ALKYWGPTTF 120
TNFPVVDYEK EIQIMQNVTR EEYLASLRRK SSGFSRGVSK YRGVARHHHN GRWEARIGRV 180
FGNKYLYLGT YSTQEEAAAA YDIAAIEYRG VNAVTNFDLS TYIRWLRPGG LNNMANLNQP 240
ERVASKIDES SIPPTPLSTM NESMAEDFRQ TTCLTWLPDI LHQPPLSPNS LTMTCRKSSS 300
SPTALSLLLQ SSVFRELVEK TSIASANEEA VSTGPTEDCR QRQRGNCPDV AASSIAIGDE 360
YGGIFYDSTH DLGDIPFICS SNDEDLVVEG SVEYFERAGS QQSLWSNVLN STIDVNM*
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