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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm_27.model.AmTr_v1.0_scaffold00122.72 |
Common Name | AMTR_s00122p00135250 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
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Family |
GRAS |
Protein Properties |
Length: 475aa MW: 53617.1 Da PI: 6.3666 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm_27.model.AmTr_v1.0_scaffold00122.72 | genome | TAGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 325.4 | 1.1e-99 | 132 | 438 | 1 | 321 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppset 69
l++lL++cA v+ g+ e a +l+++++ l + + ++a +f+ AL rl++ ++
evm_27.model.AmTr_v1.0_scaffold00122.72 132 LIHLLMSCAGSVERGEREIALKLVQEMRLLLCRNItGVIGKVAVFFVDALFWRLSG-----------HPS 190
689***************************555553899*****************...........344 PP
GRAS 70 seknsseelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegp 139
++ +s e+ + ++ f+e +P+lkf+h+t+NqaIlea++g+++vH+iDf++ +GlQWpaL+qaLa Rp+gp
evm_27.model.AmTr_v1.0_scaffold00122.72 191 NRVDSGESEFLYHHFYEGCPYLKFAHFTCNQAILEAFDGCDEVHVIDFNLIHGLQWPALIQALALRPGGP 260
4445778888999********************************************************* PP
GRAS 140 pslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlq 209
p lR+Tg+g+p+++ +++++e+g rLa++A++++v+f f+ ++++rledl++++++v++ E++aVn+v+
evm_27.model.AmTr_v1.0_scaffold00122.72 261 PFLRLTGIGPPSPDGRDTIREVGIRLAELARSVNVRFAFRGVATQRLEDLKPWMIHVRSTETVAVNSVFV 330
*****************************************9999************************* PP
GRAS 210 lhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres 279
lhrll + +++++++ vL+ v++l Pk+++vveqea+hn+ F++rf+eal+yysa+fds+e + +
evm_27.model.AmTr_v1.0_scaffold00122.72 331 LHRLLYTTPDQTQPIKPVLNWVRELGPKILTVVEQEASHNGLGFVDRFTEALHYYSAMFDSMEGS----N 396
***************************************************************99....7 PP
GRAS 280 eerikvErellgreivnvvacegaerrerhetlekWrerlee 321
++++ + +l+rei+n+v+ceg+er+erhe l +Wr r+++
evm_27.model.AmTr_v1.0_scaffold00122.72 397 RNNQAFAELYLEREIKNIVCCEGSERVERHEPLTRWRGRFDK 438
8888888899*****************************986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 475 aa
Download sequence Send
to blast |
MDYPFKTFPS TPSPPSKPEI DGLLADAGYR IKASDLPHVA HRLEQLETQM INAQPTEMTH 60 LASETVHYNP SDLATWVESM LFELNPSEIP ATSGFAGESQ SPEIGFFAGN QNRGSFSGAA 120 ILTHEEDSGI RLIHLLMSCA GSVERGEREI ALKLVQEMRL LLCRNITGVI GKVAVFFVDA 180 LFWRLSGHPS NRVDSGESEF LYHHFYEGCP YLKFAHFTCN QAILEAFDGC DEVHVIDFNL 240 IHGLQWPALI QALALRPGGP PFLRLTGIGP PSPDGRDTIR EVGIRLAELA RSVNVRFAFR 300 GVATQRLEDL KPWMIHVRST ETVAVNSVFV LHRLLYTTPD QTQPIKPVLN WVRELGPKIL 360 TVVEQEASHN GLGFVDRFTE ALHYYSAMFD SMEGSNRNNQ AFAELYLERE IKNIVCCEGS 420 ERVERHEPLT RWRGRFDKQD SNRLDSVRMR LDRRVCCSLF FRKMDLGWRR GMDA*
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