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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm_27.model.AmTr_v1.0_scaffold00053.77 |
Common Name | AMTR_s00053p00128820, LOC18433248 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
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Family |
GRAS |
Protein Properties |
Length: 463aa MW: 50508.9 Da PI: 6.5054 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm_27.model.AmTr_v1.0_scaffold00053.77 | genome | TAGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 416.5 | 2.3e-127 | 49 | 461 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppset 69
l++lLl+cA++v++g+ +a+ +L ++s laspdgd+mqR+ ayfteALaar ++ +++lykal++++
evm_27.model.AmTr_v1.0_scaffold00053.77 49 LIQLLLSCATHVATGSIDNANLCLDHISLLASPDGDSMQRVSAYFTEALAARALKvAWPGLYKALHATNL 118
689****************************************************9*********99999 PP
GRAS 70 seknsseelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegp 139
+ + +a++lf++++P+lk+++l+aNqaIlea+ege+++H+iD+++++++QW+a+lqaL+ Rp+gp
evm_27.model.AmTr_v1.0_scaffold00053.77 119 P----QPLPHARRLFFDLCPFLKLAFLLANQAILEAMEGEKMIHVIDLNATEPAQWLAFLQALSLRPGGP 184
7....678899*********************************************************** PP
GRAS 140 pslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlq 209
p++RiTgv++ ske l +t++rLa+ Ae+l+vpf+fn+ v+ +le+l++++Lr+k+gEalaV++vlq
evm_27.model.AmTr_v1.0_scaffold00053.77 185 PHVRITGVND----SKEVLDHTASRLAEEAERLDVPFQFNP-VVATLESLDPDALRIKSGEALAVCSVLQ 249
**********....***************************.7999************************ PP
GRAS 210 lhrll...............................................desvsleserdevLklvk 232
lh ll s+ ++ + + +L +++
evm_27.model.AmTr_v1.0_scaffold00053.77 250 LHALLappprgcgdeasplgvrrprqqgtlgellqkeqhhpfgqspttesstTTSLYTQTRVEGLLAFLR 319
***********************************************98876666666668899****** PP
GRAS 233 slsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvaceg 302
sPk++v+veqea+hn+++++er++eal++y alfd+le++++r+s er+ vE++l+g+ei+++v ceg
evm_27.model.AmTr_v1.0_scaffold00053.77 320 AASPKIMVLVEQEASHNGATLVERVVEALHFYGALFDCLESTVGRASPERRRVEKHLFGEEIKDIVGCEG 389
********************************************************************** PP
GRAS 303 aerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSa 372
aer+erhe+le+W rle +G+ +pls+ + qa++ ++ + +gy v ee g+++++W+drpL+svS+
evm_27.model.AmTr_v1.0_scaffold00053.77 390 AERKERHERLERWVGRLEGCGLVRAPLSYVGVGQARRAVQAWGCEGYGVREEGGCVLMCWQDRPLFSVSS 459
********************************************************************** PP
GRAS 373 Wr 374
Wr
evm_27.model.AmTr_v1.0_scaffold00053.77 460 WR 461
*8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 463 aa
Download sequence Send
to blast |
MAGIAQDDGS SSVSSSPLQI FSLMSISPGL GSPYAWLRKL KSEERGLCLI QLLLSCATHV 60 ATGSIDNANL CLDHISLLAS PDGDSMQRVS AYFTEALAAR ALKVAWPGLY KALHATNLPQ 120 PLPHARRLFF DLCPFLKLAF LLANQAILEA MEGEKMIHVI DLNATEPAQW LAFLQALSLR 180 PGGPPHVRIT GVNDSKEVLD HTASRLAEEA ERLDVPFQFN PVVATLESLD PDALRIKSGE 240 ALAVCSVLQL HALLAPPPRG CGDEASPLGV RRPRQQGTLG ELLQKEQHHP FGQSPTTESS 300 TTTSLYTQTR VEGLLAFLRA ASPKIMVLVE QEASHNGATL VERVVEALHF YGALFDCLES 360 TVGRASPERR RVEKHLFGEE IKDIVGCEGA ERKERHERLE RWVGRLEGCG LVRAPLSYVG 420 VGQARRAVQA WGCEGYGVRE EGGCVLMCWQ DRPLFSVSSW RC*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |