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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
evm_27.model.AmTr_v1.0_scaffold00048.68 |
| Common Name | AMTR_s00048p00125480 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
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| Family |
G2-like |
| Protein Properties |
Length: 163aa MW: 18136.3 Da PI: 6.2388 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm_27.model.AmTr_v1.0_scaffold00048.68 | genome | TAGP | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 98.2 | 5.8e-31 | 1 | 52 | 4 | 55 |
G2-like 4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
evm_27.model.AmTr_v1.0_scaffold00048.68 1 MRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 52
79*************************************************7 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009887 | Biological Process | organ morphogenesis |
| GO:0009944 | Biological Process | polarity specification of adaxial/abaxial axis |
| GO:0009956 | Biological Process | radial pattern formation |
| GO:0010051 | Biological Process | xylem and phloem pattern formation |
| GO:0010158 | Biological Process | abaxial cell fate specification |
| GO:0048481 | Biological Process | plant ovule development |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 163 aa
Download sequence Send
to blast |
MRWTSSLHAR FVHAVELLGG HERATPKSVL ELMDVKDLTL AHVKSHLQMY RTVKTTDRAA 60
GSSGEIDIFG NGTPGEISNE ILLENMTQRP PLQHGLDYCN MWSNSSSRRN WLQAKSRDSM 120
SMSPSSEVKG GLEDTSDELF EISSSDMNQK KPNLEFTLGR PD*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 2e-17 | 1 | 54 | 5 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 2e-17 | 1 | 54 | 5 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 2e-17 | 1 | 54 | 5 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 2e-17 | 1 | 54 | 5 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 2e-17 | 1 | 54 | 5 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 2e-17 | 1 | 54 | 5 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 2e-17 | 1 | 54 | 5 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 2e-17 | 1 | 54 | 5 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor that regulates lateral organ polarity. Promotes abaxial cell fate during lateral organd formation. Functions with KAN1 in the specification of polarity of the ovule outer integument. {ECO:0000269|PubMed:11525739, ECO:0000269|PubMed:15286295, ECO:0000269|PubMed:16623911, ECO:0000269|PubMed:17307928}. |
