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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
evm_27.model.AmTr_v1.0_scaffold00048.53 |
| Common Name | AMTR_s00048p00108400 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
|
| Family |
bZIP |
| Protein Properties |
Length: 389aa MW: 41001.4 Da PI: 8.6135 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm_27.model.AmTr_v1.0_scaffold00048.53 | genome | TAGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 68.4 | 1.1e-21 | 312 | 374 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
e+elkr+rrkq+NRe+ArrsR RK+ae+eeL+++v+ L++eN+aLk el + ++ev++l +++
evm_27.model.AmTr_v1.0_scaffold00048.53 312 ERELKRQRRKQSNRESARRSRMRKQAECEELAQRVDLLKEENTALKAELGRVRQEVEQLATQN 374
89*********************************************************9887 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 389 aa
Download sequence Send
to blast |
MGNGEVDTSA KPKTSAPQEQ PPASTATVYP DWSAIQAFYN PGTPPIPPPG FFHSSVASSP 60
QAHPYMWGPQ HIIPPYGTPP HPYVAMYPHG GLYAHPSMPP GSHPFSPYAI PSPNGNPEAS 120
GSAPAGVEGD RKSSEGKERS PLNRSKGSLG SLNMLTGKND LGKTSGASAN GAYSQSGESG 180
SEGSSEGSDA NSQNGSQQKA HCGQGSLESE ASQNGSNRAA VQNGIPRTPP QAMMNHQTMA 240
IMAMQPTAAP GGVTGPTTNL NIGMDYWGGP AASAVPALHG KIPTTPVAGA VVPSGLVGSR 300
DGVPSELWLQ DERELKRQRR KQSNRESARR SRMRKQAECE ELAQRVDLLK EENTALKAEL 360
GRVRQEVEQL ATQNASLKWI TYHLNFSR*
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| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 328 | 335 | RRSRMRKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT2G35530.1 | 1e-123 | basic region/leucine zipper transcription factor 16 |
