 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
evm_27.model.AmTr_v1.0_scaffold00046.72 |
Common Name | AMTR_s00046p00141180 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
|
Family |
SRS |
Protein Properties |
Length: 137aa MW: 14344.3 Da PI: 4.7675 |
Description |
SRS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm_27.model.AmTr_v1.0_scaffold00046.72 | genome | TAGP | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF702 | 34.4 | 6.8e-11 | 102 | 128 | 31 | 57 |
DUF702 31 rgfdCathvkstWvpaakrrerqqqla 57
gfdCat vkstWvpaa+rrer+ +
evm_27.model.AmTr_v1.0_scaffold00046.72 102 PGFDCATDVKSTWVPAARRRERHMAVV 128
59********************76554 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 137 aa
Download sequence Send
to blast |
MAPRRPGEGV PDWDPGSWPP FDLRSVEAGE LCLGFNGGSA FGPSTAGCPP STKATSPFSR 60 TFPWFSSTAL STIPPLPLPA LLVGPPIPIT TSTEVQDLLQ EPGFDCATDV KSTWVPAARR 120 RERHMAVVVT GEGAAAA
|
Best hit in Arabidopsis thaliana ? help
Back to Top |
Hit ID |
E-value |
Description |
AT5G12330.3 | 5e-07 | Lateral root primordium (LRP) protein-related |