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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm_27.model.AmTr_v1.0_scaffold00019.64 |
Common Name | AMTR_s00019p00086450, LOC18435312 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
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Family |
AP2 |
Protein Properties |
Length: 358aa MW: 39335.5 Da PI: 8.7448 |
Description |
AP2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm_27.model.AmTr_v1.0_scaffold00019.64 | genome | TAGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 52.3 | 1.5e-16 | 46 | 106 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkklege 56
s y+GV++++++gr++A+++d ++n k+ ++++lg ++ +e Aa+a++ a++k++g+
evm_27.model.AmTr_v1.0_scaffold00019.64 46 SVYRGVTRHRWTGRYEAHLWDkNCWNEsqnKKgRQVYLGAYDDEEAAARAYDLAALKYWGH 106
78*******************999955656446*************************997 PP
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2 | AP2 | 51.2 | 3e-16 | 148 | 199 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g
evm_27.model.AmTr_v1.0_scaffold00019.64 148 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 199
89****99**********99966...3.6*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009651 | Biological Process | response to salt stress |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0010187 | Biological Process | negative regulation of seed germination |
GO:0040008 | Biological Process | regulation of growth |
GO:0045723 | Biological Process | positive regulation of fatty acid biosynthetic process |
GO:1901959 | Biological Process | positive regulation of cutin biosynthetic process |
GO:0005634 | Cellular Component | nucleus |
GO:0000981 | Molecular Function | RNA polymerase II transcription factor activity, sequence-specific DNA binding |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 358 aa
Download sequence Send
to blast |
MAKTSNHQST NPTISTPYST TSTTTTQKLK RTRKSVPRDS PPQRSSVYRG VTRHRWTGRY 60 EAHLWDKNCW NESQNKKGRQ VYLGAYDDEE AAARAYDLAA LKYWGHDTIL NFPLSTYTAE 120 LKEMEGLSKE EYIGSLRRKS SGFSRGVSKY RGVARHHHNG RWEARIGRVF GNKYLYLGTY 180 ATQEEAATAY DMAAIEYRGL NAVTNFDLSR YIKWLRPNNS TNANPNPAAV THPKPSPLDD 240 VSASSQPLGV GCFEQSHHVG PPSSSAARSN GSASSALGLL LQSSKFKEML KMTSAADIST 300 KSPESEPLSA SAFPDDVQTY FECGGDSGGF VGDFAETEGM FGDLHAYGSG FLCETSL*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |