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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm_27.model.AmTr_v1.0_scaffold00012.77 |
Common Name | AMTR_s00012p00140480 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
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Family |
GRAS |
Protein Properties |
Length: 208aa MW: 23207.6 Da PI: 6.6803 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm_27.model.AmTr_v1.0_scaffold00012.77 | genome | TAGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 223.4 | 1.1e-68 | 1 | 194 | 123 | 320 |
GRAS 123 lQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlele 192
+QWpaL+qaLa Rp+gpp +R+Tg+g+p++++++ l+++ ++L ++A++l+++fe + +va++l+dle +
evm_27.model.AmTr_v1.0_scaffold00012.77 1 MQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDHLQQVSWKLGQLADTLRLEFESRGFVARSLADLEAN 70
8********************************************************************* PP
GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerfleale 262
+L+v p E++aVn++++lh+ll+++++l++ vL v+ l+P++v++veq+a+hn+ F++rf+eal+
evm_27.model.AmTr_v1.0_scaffold00012.77 71 MLDVTPSEVVAVNSIFELHKLLAQTGALDK----VLARVRALQPQIVTIVEQDANHNRLVFVDRFAEALH 136
**********************99999999....************************************ PP
GRAS 263 yysalfdsl.eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerle 320
yys+lfdsl +lp+ s++ +++++++lgr+i ++vacega+r+erhe l +W +r++
evm_27.model.AmTr_v1.0_scaffold00012.77 137 YYSSLFDSLeRCGLPPGSRD-QVMSEVYLGRQIFDIVACEGADRVERHEPLTQWTARMG 194
*********66778887765.6777888*****************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 208 aa
Download sequence Send
to blast |
MQWPALMQAL ALRPGGPPAF RLTGIGPPQP DNTDHLQQVS WKLGQLADTL RLEFESRGFV 60 ARSLADLEAN MLDVTPSEVV AVNSIFELHK LLAQTGALDK VLARVRALQP QIVTIVEQDA 120 NHNRLVFVDR FAEALHYYSS LFDSLERCGL PPGSRDQVMS EVYLGRQIFD IVACEGADRV 180 ERHEPLTQWT ARMGSRVRAR APRLERV*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that represses transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway (By similarity). {ECO:0000250}. |