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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm.model.supercontig_66.60 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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Family |
GRAS |
Protein Properties |
Length: 289aa MW: 33222.4 Da PI: 6.905 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm.model.supercontig_66.60 | genome | ASGPB | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 148.8 | 5.2e-46 | 90 | 273 | 1 | 184 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalk 82
l++lLl A+av+++++ + + L++l + +s +gd++qR++ayf +Laarl+ s y+ + +ts +e++ +++
evm.model.supercontig_66.60 90 LIRLLLLTATAVDENNADSVMRNLTELYQAVSLTGDSVQRVVAYFSDGLAARLLTRKSPFYDMILKDPTS----EEQFLSFT 167
57899**************************************************999***999888885....78888889 PP
GRAS 83 lfsevsPilkfshltaNqaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskee 157
+++ +sP+++f+h+taNqaI ea+++e +++H+iD+d+s+G+QWp+L+q+L++++ +++ lRiTg+g+ s ee
evm.model.supercontig_66.60 168 YLYRASPYYQFAHFTANQAIFEAFNKEqddnnRALHVIDLDVSYGFQWPSLIQSLSEKAtsANKIYLRITGFGR----SIEE 245
*************************9988887889***********************95445559********....9*** PP
GRAS 158 leetgerLakfAeel.gvpfefnvlvak 184
l+et+ rL +f + + ++ fef+ l+++
evm.model.supercontig_66.60 246 LQETETRLVSFSKGFhNLVFEFRGLLTS 273
************987579****998655 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 289 aa
Download sequence Send
to blast |
MENHMVADQD VDDDHDQEEL LNLSLAIVTD HDQKRRSKKK RRVVFSTSSA ADQEEGKVFK 60 LLQTREQMLK KILIDQTRKQ HDDRYGGLRL IRLLLLTATA VDENNADSVM RNLTELYQAV 120 SLTGDSVQRV VAYFSDGLAA RLLTRKSPFY DMILKDPTSE EQFLSFTYLY RASPYYQFAH 180 FTANQAIFEA FNKEQDDNNR ALHVIDLDVS YGFQWPSLIQ SLSEKATSAN KIYLRITGFG 240 RSIEELQETE TRLVSFSKGF HNLVFEFRGL LTSPSSPFQT PRSKKKEK*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 34 | 40 | RRSKKKR |
2 | 37 | 41 | KKKRR |
3 | 37 | 42 | KKKRRV |