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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
evm.model.supercontig_66.59 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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| Family |
GRAS |
| Protein Properties |
Length: 172aa MW: 19434.2 Da PI: 7.9344 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_66.59 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 117 | 2.4e-36 | 4 | 169 | 225 | 374 |
GRAS 225 devLklvkslsPkvvvvveqe.adh.nsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegae 304
+++L+ v+sl P +v++ve+e +++ + sFl f+e+l+y++a+fdsle lp es er ++E+ lg+ei++++ ++
evm.model.supercontig_66.59 4 SDTLRSVRSLHPSIVTLVEHEsCSRsTPRSFLSLFMESLQYFAAMFDSLEDCLPLESAERLSIEKNHLGKEIKSMLNYGDDH 85
679******************655556779**********************************************999888 PP
GRAS 305 rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve....ee.............sgslv.lgWkdrpLv 368
he+ e+W+ r+e+ GF+ v++s++ ++qaklll++ ++ ++ +g ++ lgW++r L+
evm.model.supercontig_66.59 86 ---HHEKIETWKGRMESHGFSGVEVSSRSMMQAKLLLKMRTHY-CPLQfggeNNyingggfrvfgrdEGKAIsLGWQGRCLL 163
...9*********************************986522.22222222224444444444444777777********* PP
GRAS 369 svSaWr 374
++SaWr
evm.model.supercontig_66.59 164 TASAWR 169
*****8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 172 aa
Download sequence Send
to blast |
MKISDTLRSV RSLHPSIVTL VEHESCSRST PRSFLSLFME SLQYFAAMFD SLEDCLPLES 60
AERLSIEKNH LGKEIKSMLN YGDDHHHEKI ETWKGRMESH GFSGVEVSSR SMMQAKLLLK 120
MRTHYCPLQF GGENNYINGG GFRVFGRDEG KAISLGWQGR CLLTASAWRC V*
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