PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.supercontig_50.3

Organism

Carica papaya

Taxonomic ID

3649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica

Family

VOZ

Protein Properties

Length: 455aa MW: 51153.6 Da PI: 6.2961

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.supercontig_50.3	genome	ASGPB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	432.6	5.3e-133	207	423	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecega 83 pppsafl+pkc+lwdctrpa gs+w+qdycs fhatlalne++pgttp++rp+gi+lkd+ll++al++k++gk+vgip+cega evm.model.supercontig_50.3 207 PPPSAFLRPKCSLWDCTRPALGSDWYQDYCSIFHATLALNEDPPGTTPTVRPGGIGLKDNLLLDALRSKTEGKNVGIPTCEGA 289 89******************************************************************************* PP VOZ 84 atakspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfe 166 a++k+pwna+elfdl lleget+rewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgg+krsyymdpqp+++fe evm.model.supercontig_50.3 290 ASRKCPWNATELFDLGLLEGETVREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEFGGQKRSYYMDPQPPGCFE 372 ******************************************************************************* PP VOZ 167 whlyeyeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 w+lyeyei+++da+alyrlelklv+e+ks+kgkv+kd+++dlqkk+grlta evm.model.supercontig_50.3 373 WRLYEYEIYSFDACALYRLELKLVKERKSPKGKVNKDPVVDLQKKMGRLTA 423 ***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence Send to blast
MKNHPRSKCT SISHQTLIDN AKNRVSDLQE RFTNLQAART EGRIGDVAVL EEQVYQSLRE 60 WKAELNAPSP ASSSFGCSLG SFSDDIARML QLCEEEDDAS SAFAEPACLK PESAVQSLCP 120 GNILGVQENC FHNNEAQEQK FQVFDQCKSP KSTMHSTMVN NAELTHQLDY DLLNSHNELN 180 HELFIGASDI EECAKDSGPN ILPSIHPPPS AFLRPKCSLW DCTRPALGSD WYQDYCSIFH 240 ATLALNEDPP GTTPTVRPGG IGLKDNLLLD ALRSKTEGKN VGIPTCEGAA SRKCPWNATE 300 LFDLGLLEGE TVREWLFFDK PRRAFESGNR KQRSLPDYSG RGWHESRKQV MKEFGGQKRS 360 YYMDPQPPGC FEWRLYEYEI YSFDACALYR LELKLVKERK SPKGKVNKDP VVDLQKKMGR 420 LTAEVPSDNN NRYVVRGMPT EHRVINQLTI KALN*

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence Send to blast

MKNHPRSKCT SISHQTLIDN AKNRVSDLQE RFTNLQAART EGRIGDVAVL EEQVYQSLRE  60
WKAELNAPSP ASSSFGCSLG SFSDDIARML QLCEEEDDAS SAFAEPACLK PESAVQSLCP  120
GNILGVQENC FHNNEAQEQK FQVFDQCKSP KSTMHSTMVN NAELTHQLDY DLLNSHNELN  180
HELFIGASDI EECAKDSGPN ILPSIHPPPS AFLRPKCSLW DCTRPALGSD WYQDYCSIFH  240
ATLALNEDPP GTTPTVRPGG IGLKDNLLLD ALRSKTEGKN VGIPTCEGAA SRKCPWNATE  300
LFDLGLLEGE TVREWLFFDK PRRAFESGNR KQRSLPDYSG RGWHESRKQV MKEFGGQKRS  360
YYMDPQPPGC FEWRLYEYEI YSFDACALYR LELKLVKERK SPKGKVNKDP VVDLQKKMGR  420
LTAEVPSDNN NRYVVRGMPT EHRVINQLTI KALN*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	evm.model.supercontig_50.3

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015039	1e-49	AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021898421.1	0.0	transcription factor VOZ2-like
Refseq	XP_021898422.1	0.0	transcription factor VOZ2-like
Swissprot	Q9SGQ0	1e-167	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A061E3L6	0.0	A0A061E3L6_THECC; Vascular plant one zinc finger protein isoform 1
STRING	evm.model.supercontig_50.3	0.0	(Carica papaya)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM11060	25	34
Representative plant	OGRP2327	13	35

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42400.1	1e-139	vascular plant one zinc finger protein 2

Link Out ? help Back to Top
Phytozome	evm.model.supercontig_50.3

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]