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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
evm.model.supercontig_181.13 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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| Family |
Trihelix |
| Protein Properties |
Length: 394aa MW: 45306.7 Da PI: 4.3533 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_181.13 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 51.7 | 2.2e-16 | 161 | 244 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmre.rgferspkqCkekwenlnkrykkikegekkrtsessstcpy 81
Wt++e+l+L++a e+ + ++++l+ W+ev++k++e +er+ +qC+++++ l+k+ykk+k + + +++ss+++y
evm.model.supercontig_181.13 161 WTERETLVLLDAWGERFLQRGKKSLRSEEWQEVAEKVSEvSEIERTDTQCRNRLDTLKKKYKKEKMNLAE--KGNSSKWVY 239
*************************************772578************************999..58899**** PP
trihelix 82 fdqle 86
f++++
evm.model.supercontig_181.13 240 FKKMD 244
****8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 394 aa
Download sequence Send
to blast |
MDDTEDDARY PPNPYGLKQQ QGYGSSNRQK LPVRNAPYSR PIDGQYVDDD ENDDDELEDE 60
DLVEEEENNN QNSGLQYVGK DMDDEDDEDD EYEEDMDELP RERQSYARRI EDDNIESHPK 120
KRKLKSLVSS YEFAPRVQVS PVAALAVPKP SFGGRNSLTD WTERETLVLL DAWGERFLQR 180
GKKSLRSEEW QEVAEKVSEV SEIERTDTQC RNRLDTLKKK YKKEKMNLAE KGNSSKWVYF 240
KKMDMLMSSP PQQGGLSCGL DSGEYVFMNP RVYLNRANGL DEMRDSPGNS ESTDGEDDES 300
DGLPLKKRKY GRESDGSSFS LLADSIQKFS EIYEKIENSK RQQMLELEKM RMDFHRELEM 360
QKRQIMERAQ AEIAKIRQGD DEGNEISAGN AGG*
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