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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm.model.supercontig_12.48 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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Family |
GRAS |
Protein Properties |
Length: 438aa MW: 49461.4 Da PI: 6.7127 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm.model.supercontig_12.48 | genome | ASGPB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 395.2 | 6.9e-121 | 42 | 437 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetsekn........ 73
+++lL++cAe +s +d+ +aq+lL+ ls ++sp+gd+++Rl++ f++AL+ r+++ ++s+ + + + ++
evm.model.supercontig_12.48 42 MRQLLITCAELLSRSDFPAAQRLLSFLSANSSPYGDSTERLVHQFARALSMRITShHGSGSVLMMLNLNLNDAAlptpvins 123
589***************************************************9544443333322222222255565555 PP
GRAS 74 .......sseelaalklfsevsPilkfshltaNqaIleave.geervHiiDfdisqGlQWpaLlqaLasRp....egppslR 143
ss++ + + +++++P+++fshltaNqaIlea+e g++++Hi+D+di+qG+QWp+L+qaLa+R+ ++pp+lR
evm.model.supercontig_12.48 124 sleedrySSTSQSCYLSLNQITPFIRFSHLTANQAILEAIEvGQQAIHILDLDIMQGVQWPPLMQALAERShnslNPPPMLR 205
55433333333333344***********************95569**************************999899***** PP
GRAS 144 iTgvgspesgskeeleetgerLakfAeelgvpfefnvl..vakrledl....eleeLrvkpgEalaVnlvlqlhrlldesvs 219
iT+ g+ + ++l++tgerL +fA++lg++f+f++l + ++ ++l +++L++ p+E+laVn+vl lhrl +++ s
evm.model.supercontig_12.48 206 ITATGH----DLNMLNTTGERLFRFAQSLGIRFSFHPLlvLNDDPASLalflIPSALAILPDESLAVNCVLYLHRLIKDDDS 283
******....9**************************965222222222223688999999****************77777 PP
GRAS 220 leserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvace 301
+ +L+ +k l+P+vv+v+e+e +hn++ Fl+rf++al++y+a+f slea+lp++s+er vE+ ++greiv++v+++
evm.model.supercontig_12.48 284 RGL--RLLLQKIKALNPTVVTVAEREGNHNHPLFLQRFVDALDHYTAIFQSLEATLPPNSRERLGVEQIWFGREIVDIVTAQ 363
766..99*************************************************************************** PP
GRAS 302 gaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
+++rrerhe++e W+++++ aGF++v+ls +a +qaklllr ++ s+gy+++ ++s++lgW++r+L++vS+Wr
evm.model.supercontig_12.48 364 QENRRERHERFEWWEMMMRGAGFSNVALSPFALSQAKLLLRLHYpSEGYKLQILNNSFFLGWHNRRLFFVSSWR 437
*************************************************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 438 aa
Download sequence Send
to blast |
MLGGSLISSS FNDQDQDQDD PSTSDHHHHN ITIPHPASAI HMRQLLITCA ELLSRSDFPA 60 AQRLLSFLSA NSSPYGDSTE RLVHQFARAL SMRITSHHGS GSVLMMLNLN LNDAALPTPV 120 INSSLEEDRY SSTSQSCYLS LNQITPFIRF SHLTANQAIL EAIEVGQQAI HILDLDIMQG 180 VQWPPLMQAL AERSHNSLNP PPMLRITATG HDLNMLNTTG ERLFRFAQSL GIRFSFHPLL 240 VLNDDPASLA LFLIPSALAI LPDESLAVNC VLYLHRLIKD DDSRGLRLLL QKIKALNPTV 300 VTVAEREGNH NHPLFLQRFV DALDHYTAIF QSLEATLPPN SRERLGVEQI WFGREIVDIV 360 TAQQENRRER HERFEWWEMM MRGAGFSNVA LSPFALSQAK LLLRLHYPSE GYKLQILNNS 420 FFLGWHNRRL FFVSSWR*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor required for axillary (lateral) shoot meristem formation during vegetative development. Seems to act upstream of REVOLUTA. {ECO:0000269|PubMed:12730136}. |