PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID augustus_masked-scaffold08240-abinit-gene-0.3-mRNA-1
Organism
Castanea mollissima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
Family EIL
Protein Properties Length: 303aa    MW: 34304.2 Da    PI: 4.3365
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
augustus_masked-scaffold08240-abinit-gene-0.3-mRNA-1genomeTHGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN31428.3e-44241261112
                                                           XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXX CS
                                                  EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiL 57 
                                                           +elkkrmwkd+m+l++ ke+ +      e++       k ++++rrkkm raQD+iL
  augustus_masked-scaffold08240-abinit-gene-0.3-mRNA-1  24 DELKKRMWKDRMRLQKFKEKLNG-----EPESL----AKQEDASRRKKMPRAQDAIL 71 
                                                           79*************77766654.....33222....35689*************** PP

                                                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                                                  EIN3  58 kYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekvefdrngpaaisky 112
                                                           kYM+ +mevc+aqGfvYgi+pekgkpv+g+s+sLr+WWkekv+fd+++p ai++ 
  augustus_masked-scaffold08240-abinit-gene-0.3-mRNA-1  72 KYMVNIMEVCKAQGFVYGIVPEKGKPVTGSSNSLRHWWKEKVRFDQDAPLAIADF 126
                                                           ****************************************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.1E-4324137No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0080167Biological Processresponse to karrikin
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MVEFHREIDP ISNSEDEAED ISYDELKKRM WKDRMRLQKF KEKLNGEPES LAKQEDASRR  60
KKMPRAQDAI LKYMVNIMEV CKAQGFVYGI VPEKGKPVTG SSNSLRHWWK EKVRFDQDAP  120
LAIADFLPEK EGGSSTSSTV CSSEKRKCVF DEQASVDTLY ACQNSECPQS DMSLGFVDKN  180
LRMDHECQCV YATKEVNYDQ GNIPSYDSLP LSFDTHWPIL TDWMTMELAK ANQNSDASIE  240
GVGDQASGSS MVDYASHWGA GIEDVALDGE FEILRENMNL NLNSLQESSD DPEATSIWDL  300
GFE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012064823.12e-56putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A067LEG71e-100A0A067LEG7_JATCU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.18e-46EIL family protein