PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc04652.1.g00020.1.sm.mkhc

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 458aa MW: 48148.2 Da PI: 8.9034

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc04652.1.g00020.1.sm.mkhc	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	25.2	3.7e-08	345	383	25	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 25 kaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kae+eeL++ v++L++eN +Lk+e+++l++ ++kl+ e+ Zpz_sc04652.1.g00020.1.sm.mkhc 345 KAETEELATQVESLTQENVSLKSEISRLTNSSEKLRLEN 383 799********************************9887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF07777	2.1E-27	111	202	IPR012900	G-box binding protein, multifunctional mosaic region
Gene3D	G3DSA:1.20.5.170	3.3E-5	345	380	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence Send to blast
VHVASCPPGT PQWSSPYQRH VSRDVAPAFG APPVPPPPPP QPFFLHLPPL LRSPVPPSVT 60 SSPLNLLLPP SSSRGAALLV GSIGPRVSGW SVKSRRPAES SPDQHIFVKG MAHDDAVATQ 120 KTGKAASPPK DQPAPYPYPD WSTMQAYYGS GVLPPTYFAP AIAPGHAPPY MWGPQPIMPP 180 PFGTPYTPMY PHNGAYPHPL VPMISNPLSV EPAKSANSKD KSFSKTLNEI NGAAASAGSG 240 NSKRTMSSSE DYSAEGSSVN EQKVSKTSRK RTSDDGPGAK MEGVIASNHT LGHTSILPNH 300 CFPAPIIKPN ATNVANLREM GAAISPSPAA IISAHTGTAT DLSIKAETEE LATQVESLTQ 360 ENVSLKSEIS RLTNSSEKLR LENSALMVKL KDPAAPKPAE SAPDKAATPG VAPRDAENFL 420 SMIDGSNTAG AAQRTEHGEP KLRQLFDSQP ATNVTAVS

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence Send to blast

VHVASCPPGT PQWSSPYQRH VSRDVAPAFG APPVPPPPPP QPFFLHLPPL LRSPVPPSVT  60
SSPLNLLLPP SSSRGAALLV GSIGPRVSGW SVKSRRPAES SPDQHIFVKG MAHDDAVATQ  120
KTGKAASPPK DQPAPYPYPD WSTMQAYYGS GVLPPTYFAP AIAPGHAPPY MWGPQPIMPP  180
PFGTPYTPMY PHNGAYPHPL VPMISNPLSV EPAKSANSKD KSFSKTLNEI NGAAASAGSG  240
NSKRTMSSSE DYSAEGSSVN EQKVSKTSRK RTSDDGPGAK MEGVIASNHT LGHTSILPNH  300
CFPAPIIKPN ATNVANLREM GAAISPSPAA IISAHTGTAT DLSIKAETEE LATQVESLTQ  360
ENVSLKSEIS RLTNSSEKLR LENSALMVKL KDPAAPKPAE SAPDKAATPG VAPRDAENFL  420
SMIDGSNTAG AAQRTEHGEP KLRQLFDSQP ATNVTAVS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc04652.1.g00020.1.sm.mkhc

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025807251.1	1e-176	common plant regulatory factor 1-like isoform X1
TrEMBL	A0A0A9PLG0	0.0	A0A0A9PLG0_ARUDO; GBF1
STRING	Pavir.J01411.1.p	1e-174	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2776	38	88

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01120.1	5e-17	G-box binding factor 2