PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc04199.1.g00040.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ZF-HD | ||||||||
Protein Properties | Length: 180aa MW: 18059.1 Da PI: 7.5642 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 27.5 | 7.2e-09 | 127 | 147 | 3 | 23 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavD 23 kv Y+eCl+NhAa+lGgh+ Zpz_sc04199.1.g00040.1.am.mk 127 KVSYRECLRNHAAALGGHVAH 147 799***************976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04770 | 1.5E-5 | 128 | 146 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence Send to blast |
SGAGLGLSVS GLGDGESAVE DSGLGAGGWR LRVDGVVRVK VGLPRSLGLS SAETSRSHAL 60 GRPVSGCQAT HALMEFTSSR GQEQVPIQEM GASSTPPLAP AAVPRAPPTS SSGNGAGAAA 120 SAAPLPKVSY RECLRNHAAA LGGHVAHAAR DEREADKGVM NALQGNCETE IKGDNKKGET |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc04199.1.g00040.1.am.mk |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP815 | 35 | 145 |