PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc03583.1.g00050.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 254aa MW: 27456.4 Da PI: 6.2417 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 23.4 | 1.3e-07 | 161 | 203 | 15 | 57 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 15 eAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 ++A rs +RK +i+eLe+kv+ L++e ++L +l l+ +a Zpz_sc03583.1.g00050.1.am.mk 161 ISAARSKERKMRYIAELEQKVQILQTEATTLSAQLTLLQRDSA 203 69********************************999987766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.9E-5 | 155 | 211 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 1.78E-17 | 161 | 203 | No hit | No description |
SuperFamily | SSF57959 | 1.45E-6 | 161 | 201 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 3.4E-7 | 161 | 203 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence Send to blast |
MDVEHAARKA AAHRRSRSDV PLGYFPPPKV EAGLGGHHDA DDLFTAFLNL EGLDGLHNSS 60 DERHDDGDRD SRGSSMKMTN GADSSENESE EGAAADRRPA GVRLWATDAI NRLEGLNLKR 120 SAAGEPSAAP MVRHARSLSV DSLIGKFNFS AGGTTSATSG ISAARSKERK MRYIAELEQK 180 VQILQTEATT LSAQLTLLQR DSAGIATQNN ELKFRLQAME QQAQLRDGNI PRAEVVDADM 240 LACPSSWVHV HLTS |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc03583.1.g00050.1.am.mk |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU971509 | 3e-73 | EU971509.1 Zea mays clone 366380 DNA binding protein mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025796879.1 | 6e-98 | transcription factor RF2b-like | ||||
TrEMBL | A0A1E5WJQ9 | 2e-96 | A0A1E5WJQ9_9POAL; Transcription factor RF2b | ||||
TrEMBL | A0A2S3IUN2 | 1e-96 | A0A2S3IUN2_9POAL; Uncharacterized protein | ||||
STRING | Pavir.J29906.1.p | 5e-95 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3536 | 35 | 76 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G21230.2 | 8e-20 | bZIP family protein |