PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc03540.1.g00050.1.am.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 397aa MW: 42376.9 Da PI: 7.529

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc03540.1.g00050.1.am.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	29.8	1.3e-09	256	314	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr +r NR +A rs +R+ +i+eLe+kv+ L++e ++L +l l+ ++ l +++ Zpz_sc03540.1.g00050.1.am.mk 256 KRVKRVLANRQSAARSKERRMRYIAELEQKVQILQTEATTLSAQLTLLQRDSSGLATQN 314 999******************************************99998887776665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.7E-16	252	316	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.714	254	317	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.6E-9	256	314	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.8E-10	256	313	No hit	No description
SuperFamily	SSF57959	1.62E-10	256	306	No hit	No description
CDD	cd14703	3.14E-23	257	306	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence Send to blast
MNGAANGHGL VPHHHHHHPA QASAPFAAQH QGSGGGRQLA GLPPTPPGSH AAHADVCMDD 60 ASAARAQAQG GGGLPPRKAH RRSRSDVPFG YFQPPSPKTE ASGGGWGLPV SGGGGDDLFN 120 AYMSMDGVDA GLRYGSDGDS LGSSMRTNGA DSSENESEDY GGGADSQFLV WGDAAGKKSR 180 EGGKRNGARE PAAAPAGRGH ARSLSMDSLI GKLSFSANGE PSKFSLDFGG GEFTPAEMKR 240 IMADEKLAEM ALADPKRVKR VLANRQSAAR SKERRMRYIA ELEQKVQILQ TEATTLSAQL 300 TLLQRDSSGL ATQNNELKFR LQAMEQQAQL RDALNEALTA EVQRLKVGDA SSSSNLPQQM 360 QLHCQSQMQE LHKQQQGEQI PFYQLEQREV ARNHEAK

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence Send to blast

MNGAANGHGL VPHHHHHHPA QASAPFAAQH QGSGGGRQLA GLPPTPPGSH AAHADVCMDD  60
ASAARAQAQG GGGLPPRKAH RRSRSDVPFG YFQPPSPKTE ASGGGWGLPV SGGGGDDLFN  120
AYMSMDGVDA GLRYGSDGDS LGSSMRTNGA DSSENESEDY GGGADSQFLV WGDAAGKKSR  180
EGGKRNGARE PAAAPAGRGH ARSLSMDSLI GKLSFSANGE PSKFSLDFGG GEFTPAEMKR  240
IMADEKLAEM ALADPKRVKR VLANRQSAAR SKERRMRYIA ELEQKVQILQ TEATTLSAQL  300
TLLQRDSSGL ATQNNELKFR LQAMEQQAQL RDALNEALTA EVQRLKVGDA SSSSNLPQQM  360
QLHCQSQMQE LHKQQQGEQI PFYQLEQREV ARNHEAK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc03540.1.g00050.1.am.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012698006.1	1e-180	transcription factor RF2b
TrEMBL	A0A0E0MA28	1e-173	A0A0E0MA28_ORYPU; Uncharacterized protein
STRING	OPUNC10G15060.1	1e-174	(Oryza punctata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3536	35	76

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	3e-60	bZIP family protein