PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02985.1.g00040.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 637aa    MW: 69781 Da    PI: 9.7313
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02985.1.g00040.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY54.32.7e-17140184243
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SS CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversae 43 
                                   +D ++WrKYG K++ gse+pr YY+C+++   +Cp+kk v++ ++
  Zpz_sc02985.1.g00040.1.am.mk 140 NDRFHWRKYGEKKILGSEYPRLYYKCSYSddhKCPAKKYVQQHNN 184
                                   79**************************99999*******99874 PP
2WRKY68.41.1e-21475533257
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--S CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHn 57 
                                   dDg+ WrKYG K + ++++ r Y+rC+++   gC +kk+v++++edp+++++tY geH+
  Zpz_sc02985.1.g00040.1.am.mk 475 DDGFVWRKYGEKIISDQRYRRLYFRCSYRdehGCGAKKQVQQTQEDPSLFQTTYFGEHT 533
                                   8***************************99999*************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.5E-17129184IPR003657WRKY domain
SuperFamilySSF1182901.83E-16135185IPR003657WRKY domain
SMARTSM007741.9E-18139193IPR003657WRKY domain
PROSITE profilePS5081114.917140184IPR003657WRKY domain
PfamPF031067.0E-16140187IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.2E-22468534IPR003657WRKY domain
PROSITE profilePS5081120.128469537IPR003657WRKY domain
SuperFamilySSF1182901.09E-21472536IPR003657WRKY domain
SMARTSM007742.3E-29474538IPR003657WRKY domain
PfamPF031061.8E-21475533IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009863Biological Processsalicylic acid mediated signaling pathway
GO:0042742Biological Processdefense response to bacterium
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 637 aa     Download sequence    Send to blast
MSTRPKSKTV SPPPPSPRAT SNQRDAAIQE LRRVSHLAAK LRQQLELIPE VDRLEAAADN  60
VSEIADAMKS SLSILQSASE QYYSSEAGAM AMASPAVHAS DGSTGASRIA VPRARKVRHR  120
RGRLGEEVPI KEILTDAPEN DRFHWRKYGE KKILGSEYPR LYYKCSYSDD HKCPAKKYVQ  180
QHNNSDPPQS NQGKAERANV TAPAIPPRHC HGVMAAARPR PAARRCRHGR PVAPCDPPRS  240
GHAPRPKPTV TVPRRDGCSC PEQSCGVPTD ELIVMYPKGT YVTARLSTEG EVTVLARSPR  300
NGEGLAWGTL TQMPIDLLRT ERRHVCQQSA RIISAARRRI RRSTKKPRTW PMKRSNSAGA  360
QAQIISVASF RARKMATTAE STSAACELVA GAREPAVSLL ALLQAIGADS DKQSLAKQII  420
RCIDRALAAV RGAGDDKKRR PPAHGPTTRP PAGSSKRRVT GREETGARVV SSTIDDGFVW  480
RKYGEKIISD QRYRRLYFRC SYRDEHGCGA KKQVQQTQED PSLFQTTYFG EHTPACPRDD  540
APVAVVDRTS VPQVPFLASS SVGAGNDSLC HGDDEAPPSL PVKVELMQAN VAEFTEDCPV  600
DDRLMEWASA DVSFASPAFV GLESLDGLEE LISLLWS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A4e-14469533367OsWRKY45
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00070PBMTransfer from AT5G01900Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc02985.1.g00040.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1869769
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01900.11e-23WRKY DNA-binding protein 62