PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01527.1.g00150.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 137aa    MW: 15038.7 Da    PI: 9.9314
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01527.1.g00150.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like98.83.7e-3174127255
                       G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                   prlrWtpeLH +F++ave+LGG+e+AtPk +l+lm+vkgL + hvkSHLQ+YR+
  Zpz_sc01527.1.g00150.1.sm.mk  74 PRLRWTPELHLCFLRAVERLGGQERATPKLVLQLMNVKGLRIGHVKSHLQMYRS 127
                                   9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.608.5E-3070128IPR009057Homeodomain-like
PROSITE profilePS512949.81770130IPR017930Myb domain
SuperFamilySSF466893.94E-1571128IPR009057Homeodomain-like
TIGRFAMsTIGR015575.4E-2373128IPR006447Myb domain, plants
PfamPF002493.2E-975126IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    Send to blast
MEENSRSFAR SKNQGDAGED DAPAAVEDSP HYWHGGSSSN SSSVDMEVAA AGGDSGRKTA  60
ASSSVRPYIR SKNPRLRWTP ELHLCFLRAV ERLGGQERAT PKLVLQLMNV KGLRIGHVKS  120
HLQMYRSKNT DDSRQGT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A3e-1975127456Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B3e-1975127456Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A3e-1975127355Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-1975127355Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-1975127355Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-1975127355Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A3e-1975127456Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C3e-1975127456Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D3e-1975127456Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F3e-1975127456Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H3e-1975127456Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J3e-1975127456Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00301DAPTransfer from AT2G40260Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01527.1.g00150.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0684403e-66BT068440.1 Zea mays full-length cDNA clone ZM_BFb0191O11 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021317375.13e-53putative Myb family transcription factor At1g14600
RefseqXP_021317376.13e-53putative Myb family transcription factor At1g14600
TrEMBLA0A2T7A9X57e-49A0A2T7A9X5_9POAL; Uncharacterized protein
STRINGSb08g000510.15e-50(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44083671
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40260.17e-39G2-like family protein