PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01018.1.g00040.1.sm.mkhc
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 187aa    MW: 20499.2 Da    PI: 10.957
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01018.1.g00040.1.sm.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1223.6e-071061301741
                                     HHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeae 41 
                                     A+rsR RK+++i+eLe+kv++L+ +
  Zpz_sc01018.1.g00040.1.sm.mkhc 106 AQRSRVRKLQYIAELEKKVQTLQDQ 130
                                     89*******************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF579594.98E-5104139No hitNo description
CDDcd147031.34E-12104128No hitNo description
Gene3DG3DSA:1.20.5.1701.8E-6106130No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    Send to blast
MARATGSTGA PRRRASSRSN RHGSFALFDG VTYCARGFET TGRGGGMAAP WGGVQDYYAK  60
PGSLRLQGRP WDHGMPNSRV YRHGSSPPMP AKEKAVGHHG LAKQYAQRSR VRKLQYIAEL  120
EKKVQTLQDQ LKWGWSKANR WWCCSTLQHA LWLCTGTMNN SVFAGNVLVG DWSSQVTISA  180
ATATAAT
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01018.1.g00040.1.sm.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020179977.13e-30uncharacterized protein At4g06598
TrEMBLT1N6J43e-31T1N6J4_TRIUA; Uncharacterized protein
STRINGTRIUR3_26059-P15e-32(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP3585822
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.22e-09bZIP family protein