PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc00738.1.g00010.1.am.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 626aa MW: 67844.4 Da PI: 9.8937

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc00738.1.g00010.1.am.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	37.6	4.9e-12	106	134	2	31
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPkt 31 prlrWtp+LH +Fv+ave+LGG+e +Pk+ Zpz_sc00738.1.g00010.1.am.mk 106 PRLRWTPDLHMAFVHAVERLGGQE-NVPKQ 134 8*******************9998.58886 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	3.2E-10	102	134	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 626 aa Download sequence Send to blast
MMMRGVTDQK QVLQVLDDDE EIRSMGNNAL DLNVDVVSEE GEVGDDDDED DGDGGSTTDA 60 AGSRSSSNNS STNKDSESKK GCGGEVEGSG EKRVPSVRPY NRSKLPRLRW TPDLHMAFVH 120 AVERLGGQEN VPKQEARPGR SPEGSMHSPM DFHFMRGERG FHGLSFLQRA AALSSSGPEH 180 GGFFASRNGG RTDFSRIYGL LQHHRQLQMQ SFDFRSSSFR RHERALNQWE EVITRKEVFK 240 PPSTSRPQPH HPLAPSPASI SSERRWWPFA DAGTAVAGEH TRVDTGQGAN FESSFGSNSR 300 PLSWVVSGDL HLPFRRRPGS GGSHVSNNTV MIRKPSDPVV IDEAPDDAQQ LERQEYVEPI 360 RGACRKRPLP EAQDSTAPEL QLSLSHSPTA AVDDAKKRKT AAAAGEQEVI HSSELSISLS 420 LWPPAAASMQ LQHPPREKTR GSTGSGSGEA VLGQSTLDLT MSIRALDPQL AEQPESEHPS 480 GPTGSLQRGP SIRPFQSAAA GAKSLSHLAR TPRDRIPNQK HLLPLSLPPA LINHLTRSPL 540 PSSPPHFHSP CSPPVHSRRR APVRRRRGVP AATRASARAG VASRHVTPTG QLPSIAPPNA 600 AVARARSIRA AFSVAGAGFW GRIGFD

Sequence ? help Back to Top

Protein Sequence Length: 626 aa Download sequence Send to blast

MMMRGVTDQK QVLQVLDDDE EIRSMGNNAL DLNVDVVSEE GEVGDDDDED DGDGGSTTDA  60
AGSRSSSNNS STNKDSESKK GCGGEVEGSG EKRVPSVRPY NRSKLPRLRW TPDLHMAFVH  120
AVERLGGQEN VPKQEARPGR SPEGSMHSPM DFHFMRGERG FHGLSFLQRA AALSSSGPEH  180
GGFFASRNGG RTDFSRIYGL LQHHRQLQMQ SFDFRSSSFR RHERALNQWE EVITRKEVFK  240
PPSTSRPQPH HPLAPSPASI SSERRWWPFA DAGTAVAGEH TRVDTGQGAN FESSFGSNSR  300
PLSWVVSGDL HLPFRRRPGS GGSHVSNNTV MIRKPSDPVV IDEAPDDAQQ LERQEYVEPI  360
RGACRKRPLP EAQDSTAPEL QLSLSHSPTA AVDDAKKRKT AAAAGEQEVI HSSELSISLS  420
LWPPAAASMQ LQHPPREKTR GSTGSGSGEA VLGQSTLDLT MSIRALDPQL AEQPESEHPS  480
GPTGSLQRGP SIRPFQSAAA GAKSLSHLAR TPRDRIPNQK HLLPLSLPPA LINHLTRSPL  540
PSSPPHFHSP CSPPVHSRRR APVRRRRGVP AATRASARAG VASRHVTPTG QLPSIAPPNA  600
AVARARSIRA AFSVAGAGFW GRIGFD

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc00738.1.g00010.1.am.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025824409.1	1e-126	uncharacterized protein LOC112899951 isoform X1
TrEMBL	A0A2S3GN02	1e-124	A0A2S3GN02_9POAL; Uncharacterized protein
STRING	Si016955m	1e-120	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2754	36	86

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	7e-13	G2-like family protein