PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc00506.1.g00120.1.sm.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | WRKY | ||||||||
Protein Properties | Length: 306aa MW: 32588.3 Da PI: 6.9045 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 98.3 | 4.9e-31 | 87 | 145 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY+++Hnh+ Zpz_sc00506.1.g00120.1.sm.mk 87 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPSMLIITYTSDHNHP 145 699************************998****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 32.512 | 81 | 147 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 2.6E-31 | 84 | 147 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.75E-26 | 84 | 147 | IPR003657 | WRKY domain |
SMART | SM00774 | 3.8E-37 | 86 | 146 | IPR003657 | WRKY domain |
Pfam | PF03106 | 5.0E-26 | 88 | 145 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 306 aa Download sequence Send to blast |
MIQHVISGPP PQLLGAAGVA DLRECDVAAP EMDEHGLDMA MDAHPHHAAV IKSRKSQAKK 60 VVCIPAPTAA PLGVGGRPST GGEVVPSDLW AWRKYGQKPI KGSPYPRGYY RCSSSKGCSA 120 RKQVERSRTD PSMLIITYTS DHNHPWPTQR NALAGSTRPA ASSSAASKSH PSIGAVVPPP 180 PSLHHHTTGV AGDSGLSNSI GDDVHHQVPK KEVIDVMDHR RAEQDAAAGG DHGLDMLANM 240 DGAINTVPAS NFNPQNQQQH AIAGDDDHHL EQDDKQQLFD PVSFVFLDSW VGASFRIGDA 300 NKGGYT |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 4e-24 | 55 | 148 | 2 | 80 | Disease resistance protein RRS1 |
5w3x_D | 4e-24 | 55 | 148 | 2 | 80 | Disease resistance protein RRS1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc00506.1.g00120.1.sm.mk |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008658838.1 | 1e-101 | probable WRKY transcription factor 35 | ||||
TrEMBL | A0A1D6KA86 | 1e-100 | A0A1D6KA86_MAIZE; Putative WRKY transcription factor 14 | ||||
TrEMBL | A0A317YCF9 | 1e-100 | A0A317YCF9_MAIZE; Putative WRKY transcription factor 35 | ||||
STRING | GRMZM2G383594_P01 | 1e-101 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP11847 | 30 | 39 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34830.1 | 3e-58 | WRKY DNA-binding protein 35 |