PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc00360.1.g00240.1.sm.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 337aa MW: 33610.4 Da PI: 7.3888

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc00360.1.g00240.1.sm.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.5	7e-39	34	92	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +al+cprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+s Zpz_sc00360.1.g00240.1.sm.mk 34 AEALRCPRCDSANTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRS 92 57899****************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	6.0E-32	31	90	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.5E-33	36	91	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.385	37	91	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	39	75	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence Send to blast
MAGAGGATAV QQPSEGAGKS GTGAAGAPVV DPRAEALRCP RCDSANTKFC YYNNYSLSQP 60 RHFCKACKRY WTRGGTLRNV PVGGGCRKNK RSRTSAASAA GRTVSSAAAA GATSSSAASA 120 LSLPPPAGVS SSMQSLTSAL GLSGGTSLAS LLLGGGSGAD HLGLFQVAMQ SVVSDTTAYE 180 MQQQTQTQVD HLLGLGGYGS GAAGAQIQLK PWIQDSGAGA GGIMDTFYAP LLSSSVVPGL 240 EELHVKAEAA GAGEHQQAKV DAGAGDQNSW ELPTPSSTSN IDANIIASDA LMAAAAASMT 300 NNPAPSSFMY WGNGGIGGAA ASWPDLANCG SSIATLF

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc00360.1.g00240.1.sm.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025803596.1	1e-132	dof zinc finger protein 2-like
TrEMBL	A0A3L6T9P7	1e-135	A0A3L6T9P7_PANMI; Dof zinc finger protein DOF5.1-like
STRING	Sb02g034320.1	1e-125	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP8895	30	41

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	2e-33	TARGET OF MONOPTEROS 6