PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00357.1.g00340.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 376aa    MW: 40779.9 Da    PI: 8.2896
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00357.1.g00340.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM38.14.5e-12591928126
                           NAM   8 hPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknr..at 78 
                                   hPtd  l+ +yL++ ++ ++   + + +++ +diy + P +L +      +  ++ + wyf +  +    +g r  r   t
  Zpz_sc00357.1.g00340.1.am.mk  59 HPTDLTLIEDYLRPWLTFDRapPPSAPFVHVADIYAAGPAELTArfapavSRGGGGRAWYFLTLLRPMFGKGIRFARvvDT 139
                                   9**************99888544444558888**********854677543334778********************5448 PP

                           NAM  79 ksgy...Wkatgkdkevlsk....kgelvglkktLvfykgrapkgektdWvmhey 126
                                   ++g    W+ + ++++v+++    +g++vg  + + f   r  + ++t W+m   
  Zpz_sc00357.1.g00340.1.am.mk 140 RDGWwwwWRCQSSERPVVDAgaapGGKQVGRCQDFSFR--RIVDRVRTGWIMRAL 192
                                   89986657899********999999999*********8..677778******865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100522.11752214IPR003441NAC domain
PfamPF023651.3E-558191IPR003441NAC domain
SuperFamilySSF1019416.02E-1959213IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    Send to blast
MGFTVAFLTC GPHRLRPSPI YSPRRFRRPP PVPNPTLITS PTDTPNMRSR RVAHLVASHP  60
TDLTLIEDYL RPWLTFDRAP PPSAPFVHVA DIYAAGPAEL TARFAPAVSR GGGGRAWYFL  120
TLLRPMFGKG IRFARVVDTR DGWWWWWRCQ SSERPVVDAG AAPGGKQVGR CQDFSFRRIV  180
DRVRTGWIMR ALRVGCGDGG LKEEVRVLCK VYRNPRLPAD PSYSEPTAVH SREGAEEDED  240
DGCASSAAAA PVPGGRDEKA VNSEGYGGTS VVLALPAPAR EREPADGESS VAARKRPHAE  300
DGDEQSSDAA GSKRRKTEGA DTDSSGAPAT APHCPQDAAQ AGVVAVAESE ILDPLRLAIL  360
VPGDSAVRAH IFYHFF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1293315RKRPHAEDGDEQSSDAAGSKRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00357.1.g00340.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2744533
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10480.11e-07NAC domain containing protein 50