PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00309.1.g00410.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 371aa    MW: 39862.7 Da    PI: 6.9387
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00309.1.g00410.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.15.6e-31190248259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                   +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY+ eHnh+
  Zpz_sc00309.1.g00410.1.sm.mk 190 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCMARKQVERSRSDPNMLVITYTAEHNHP 248
                                   699************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081133.247184250IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.0E-30187250IPR003657WRKY domain
SuperFamilySSF1182901.7E-26188250IPR003657WRKY domain
SMARTSM007744.3E-38189249IPR003657WRKY domain
PfamPF031068.1E-26191248IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MDMDHEAIAG AAQGDLADVV ARASAMAALP STSHGHHLQP PPPSSPAPAA ADHMPASASS  60
MADQILMNPY YGEDRRHAAV MFETAPSTVD PYLSSSVTAP RGGYWLPPQP LPVQISQQHA  120
CDGGRDTVMM TGAAAAGVEG EDSTRSSSLT PAVAGHQMMK RRKDVKKVVC IPAPPSTMNN  180
RPGGGEVIPS DLWAWRKYGQ KPIKGSPYPR GYYRCSSSKG CMARKQVERS RSDPNMLVIT  240
YTAEHNHPWP MQRNVLAGYS RPHTNVSTGC KKKNSCRVEN PTSSSLSPPS RNIEHNVVAS  300
GDIEYQQSTN IMESVCPMGA LGTEGVVPAT GNCIQPVDEV FTELEELEST SNNPVSANVY  360
SRGVGYEWNN F
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B6e-24165250579Disease resistance protein RRS1
5w3x_D6e-24165250579Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00309.1.g00410.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004980994.11e-123probable WRKY transcription factor 14
TrEMBLA0A1E5W4D51e-125A0A1E5W4D5_9POAL; Putative WRKY transcription factor 35
STRINGPavir.Ia00085.1.p1e-129(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP134662832
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.13e-49WRKY DNA-binding protein 35