PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00208.1.g00390.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 407aa    MW: 44261.1 Da    PI: 8.4354
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00208.1.g00390.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY68.69.5e-22243301257
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--S CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHn 57 
                                   dDg++WrKYG K + ++ + r Y+rC+++   gC +kk+v++++edp+++++tY geH+
  Zpz_sc00208.1.g00390.1.am.mk 243 DDGFAWRKYGEKIISDQWYQRFYFRCSYRdehGCGAKKQVQQTQEDPSLFQTTYFGEHT 301
                                   8***************************99999*************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.6E-22236302IPR003657WRKY domain
PROSITE profilePS5081120.426237305IPR003657WRKY domain
SuperFamilySSF1182902.62E-22240304IPR003657WRKY domain
SMARTSM007743.9E-29242306IPR003657WRKY domain
PfamPF031061.5E-21243301IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 407 aa     Download sequence    Send to blast
MAAARPRPAA RRCRHGRPVA PCDPPRSGHA PRPKPTVTVP RRDGCSCPEQ SCGVPTDELI  60
VMYPKGTTAR LSTEGEVTVL ARSPRNGEVL AWGTLTQMPI DLLRTERQHV CQQSARIISA  120
ARRRIRRSTK KPRTCPSDLA RKMATTAEST SAACELVAGA REPAVRLLAL LQAIDADPDK  180
QSLAKQIIRC IDRALAAVRG AGDDKKRRPP AHGPTTRPPA GSSKRRVTGR GETGARVVSS  240
TIDDGFAWRK YGEKIISDQW YQRFYFRCSY RDEHGCGAKK QVQQTQEDPS LFQTTYFGEH  300
TPACPRDDAP VAVVDRTSVP QVPFLASSSV GAGNDSLCHG DDEAPPSLPV KAELMQANVA  360
EFTEDCPVDD RLMEWASADV SFASPASVGL ESLDGLEELI SLLWSGD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-14237301367OsWRKY45
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00208.1.g00390.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025810145.14e-61probable WRKY transcription factor 38
TrEMBLA0A2T7ECH41e-64A0A2T7ECH4_9POAL; Uncharacterized protein
STRINGPavir.J05250.1.p1e-66(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1869769
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01900.12e-23WRKY DNA-binding protein 62