PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc00158.1.g00560.1.sm.mkhc

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 461aa MW: 51585.7 Da PI: 6.7205

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc00158.1.g00560.1.sm.mkhc	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	28.8	2.7e-09	167	189	3	25
XXCHHHCHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKk 25 ++k err+++NReAAr+sR+RKk Zpz_sc00158.1.g00560.1.sm.mkhc 167 DDKTERRLAQNREAARKSRLRKK 189 589*******************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	7.0E-7	167	235	No hit	No description
PROSITE pattern	PS00036	0	172	187	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	1.4E-29	223	298	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence Send to blast
MDPFSLHPYR HTSDLHFQEL QPSDTACFGE LEKALVHGTR DTSMIGSDVH AKAAGYLAAR 60 PPTLEIFPSW PMSHLQQQYS GNSQSVGSSS GSSSGQNTMP QAELVSPWST RADSGHQHEA 120 LMVSVDDYNY GQGFGATAAT APIFQQHTAG QDKRRHESTR KDGKLLDDKT ERRLAQNREA 180 ARKSRLRKKG LFLGGCSGTG DMSSGAIMFD MEYARWLDDE SKHLTELQGA LQAQLIDANL 240 GVIVEDCMRH YDELFHLRAV LARSDVFHLM TGMWATTAER CFLWMGGFRP SEILKMLIPQ 300 LDPLTEQQLL GMCNLRQSSE QTEEALVQGL QQLHQSLADA VGAGPLDDGA SLTNYTGLMA 360 LALDRLDSLE SFYRQADNLR QQALHHMRRI LTTRQTARCF LSIGEYHRRL RALSSAWTSR 420 PRENFVATEN VSPTGTDQAI LHHQHQHQQQ QHHNQSQFSG F

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence Send to blast

MDPFSLHPYR HTSDLHFQEL QPSDTACFGE LEKALVHGTR DTSMIGSDVH AKAAGYLAAR  60
PPTLEIFPSW PMSHLQQQYS GNSQSVGSSS GSSSGQNTMP QAELVSPWST RADSGHQHEA  120
LMVSVDDYNY GQGFGATAAT APIFQQHTAG QDKRRHESTR KDGKLLDDKT ERRLAQNREA  180
ARKSRLRKKG LFLGGCSGTG DMSSGAIMFD MEYARWLDDE SKHLTELQGA LQAQLIDANL  240
GVIVEDCMRH YDELFHLRAV LARSDVFHLM TGMWATTAER CFLWMGGFRP SEILKMLIPQ  300
LDPLTEQQLL GMCNLRQSSE QTEEALVQGL QQLHQSLADA VGAGPLDDGA SLTNYTGLMA  360
LALDRLDSLE SFYRQADNLR QQALHHMRRI LTTRQTARCF LSIGEYHRRL RALSSAWTSR  420
PRENFVATEN VSPTGTDQAI LHHQHQHQQQ QHHNQSQFSG F

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc00158.1.g00560.1.sm.mkhc

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004961926.1	0.0	transcription factor TGAL5 isoform X1
Refseq	XP_022680634.1	0.0	transcription factor TGAL5 isoform X1
Swissprot	Q6F2N0	0.0	TGAL5_ORYSJ; Transcription factor TGAL5
TrEMBL	A0A368QHY5	0.0	A0A368QHY5_SETIT; Uncharacterized protein
STRING	OMERI05G15000.1	0.0	(Oryza meridionalis)
STRING	OS05T0443900-01	0.0	(Oryza sativa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3809	31	66

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.3	1e-111	bZIP family protein

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Cheng CH, et al. A fine physical map of the rice chromosome 5. Mol. Genet. Genomics, 2005. 274(4): p. 337-45 [PMID:16261349] Chern M, et al. Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709]