PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00020.1.g00070.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 321aa    MW: 34679.2 Da    PI: 9.2932
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00020.1.g00070.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM161.62.9e-50131411128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.leleev.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk 79 
                                   lppGfrFhP+d+elv++yL++kv+g+  ++ ++  + +vd+++vePwdLp++++ + +ewyfFs +d+kyatg+r+nrat 
  Zpz_sc00020.1.g00070.1.am.mk  13 LPPGFRFHPRDDELVCDYLAPKVAGRVgFSGSRPpMVDVDLNRVEPWDLPAAASVGPREWYFFSLKDRKYATGQRTNRATV 93 
                                   79***********************9986665666***************88888999*********************** PP

                           NAM  80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   sgyWkatg+d++v + +g+lvg++ktLvfy+grapkg+kt+Wv heyr+
  Zpz_sc00020.1.g00070.1.am.mk  94 SGYWKATGNDRPVAR-RGALVGMRKTLVFYQGRAPKGRKTEWVTHEYRM 141
                                   **************9.999****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.09E-564165IPR003441NAC domain
PROSITE profilePS5100555.0313165IPR003441NAC domain
PfamPF023652.1E-2514141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MSASFLSMVE AGLPPGFRFH PRDDELVCDY LAPKVAGRVG FSGSRPPMVD VDLNRVEPWD  60
LPAAASVGPR EWYFFSLKDR KYATGQRTNR ATVSGYWKAT GNDRPVARRG ALVGMRKTLV  120
FYQGRAPKGR KTEWVTHEYR MEGHEQSPKL AAKEEDWVLC RVICKKKSAG GGATTKPARG  180
FATNGYDTAT TTSPPPPALM DTTLAQLQAA MNTKGAGAGA IEQVPCFSSF NNIASNSVSA  240
ANAAQQCYLP VATSSNGMSY LDHGLTDLGS CFDPLNSDKK WLKAVLSQVG GAVMHSPPPD  300
VAAAASSTWM NHFYENYGGR I
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A6e-501016612169Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00020.1.g00070.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025805880.11e-176NAC domain-containing protein 21/22-like
TrEMBLA0A2T7EJ771e-175A0A2T7EJ77_9POAL; Uncharacterized protein
STRINGSi022747m1e-157(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP100223144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56010.23e-73NAC domain containing protein 1