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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Zpz_sc00018.1.g00560.1.am.mkhc |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
LSD |
Protein Properties |
Length: 131aa MW: 13639 Da PI: 8.5914 |
Description |
LSD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zpz_sc00018.1.g00560.1.am.mkhc | genome | ZGD | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-LSD1 | 39.4 | 1e-12 | 37 | 61 | 1 | 25 |
zf-LSD1 1 CggCrtlLsYPrGApsVRCalCdtV 25
C gCrt+L YP GApsV+Ca+C+++
Zpz_sc00018.1.g00560.1.am.mkhc 37 CRGCRTVLLYPQGAPSVCCAVCQAI 61
9**********************97 PP
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2 | zf-LSD1 | 23.4 | 1e-07 | 76 | 89 | 1 | 14 |
zf-LSD1 1 CggCrtlLsYPrGA 14
CggCrtlL+Y+r+A
Zpz_sc00018.1.g00560.1.am.mkhc 76 CGGCRTLLMYTRNA 89
************99 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 131 aa
Download sequence Send
to blast |
MIDLLIGFGA GVPARTVRRR SGGVVAFASC MENQIVCRGC RTVLLYPQGA PSVCCAVCQA 60 ITTVPPPGLE MAQLICGGCR TLLMYTRNAD TPKTQPQNVT VVVENPMTVD EKGKLVSNVA 120 VGVTAGSAGK N
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