PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma5g00890.1
Common NameZOSMA_5G00890
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bZIP
Protein Properties Length: 302aa    MW: 34900.1 Da    PI: 7.7172
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma5g00890.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.16e-112150534
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeek 34
                    k  +r+++NReAA++sR+RKk+ +++Le  
  Zosma5g00890.1 21 KTLKRLAQNREAAKKSRLRKKEHMQQLESS 50
                    6789***********************974 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.2E-81056No hitNo description
SMARTSM003383.2E-61793IPR004827Basic-leucine zipper domain
PfamPF077161.6E-81859IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.8641961IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.0E-72155No hitNo description
PROSITE patternPS0003602439IPR004827Basic-leucine zipper domain
PfamPF141443.5E-28102176IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MCFPLIQQHQ EEAPEKTLDP KTLKRLAQNR EAAKKSRLRK KEHMQQLESS KIKLAQLEQD  60
LLIAQSQGIF SHGTGPGGNL SSGASKFDME YARWLDNGHK RMSELRGALQ RQLLDSDLRV  120
IVDEWHTHYD EIFPLKSVVA KSDVFHLITG VWTNPAERFF LWMGGFRPSE MLKILIPYLD  180
PLTEQQLGDI CNLQQSSQQT EEMLSKRLDQ LHQSLATTVV GESLSYKEFD RDYMDLMSVA  240
VEKLTDIEQF VIQADMLRQQ MLHQMRRILT IRQAARCFLA IGEYHSRLRT VSTLWSSRPR  300
E*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010907104.11e-139transcription factor TGA2.2
RefseqXP_019702357.11e-139transcription factor TGA2.2
SwissprotQ53Q701e-132TGAL4_ORYSJ; Transcription factor TGAL4
TrEMBLA0A0K9NTY00.0A0A0K9NTY0_ZOSMR; Putative Transcription factor
STRINGPavir.Ha01753.1.p1e-139(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44443670
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.21e-121bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]
  3. Miyamoto K, et al.
    Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells.
    J. Plant Physiol., 2015. 173: p. 19-27
    [PMID:25462074]