PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma44g01030.1
Common NameZOSMA_44G01030
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bHLH
Protein Properties Length: 356aa    MW: 38525.1 Da    PI: 8.5966
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma44g01030.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.25.2e-12287332655
                      HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      +++Er RR ri +++ +L+el+P+     +k  s a++L +Av++Ik Lq
  Zosma44g01030.1 287 SIAERERRTRISEKLRKLQELVPNM----DKQTSTADMLDLAVQHIKGLQ 332
                      689*********************7....688*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.646281331IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.79E-15284342IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.05E-12285336No hitNo description
Gene3DG3DSA:4.10.280.101.0E-13286343IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.3E-9287332IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-12287337IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010119Biological Processregulation of stomatal movement
GO:0005829Cellular Componentcytosol
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    Send to blast
MSMSPMALTR YESAPGSFFS SLVADIDNGS SRKNNNNTNT NINGSDVNND LNFLGRTRFF  60
TQAGESPCLT SESSCKVADL NKNKSVELEM GLDRSYVVDE MQVGDLMMSS RGSGGLRGGG  120
SSSPLFRHSS SPAGFLSHLM VDNQNGLPVM RGSRGVAGYS SQTASDAIHA MAPIRRLKSQ  180
LSFSSRQDSL SHLSAITSDE AAAQTYMASN FQIGSWDDTN SIVFTAPGGK RGKNNNGDAI  240
AAALGNIDSP TMNLLDMGNV ESLFKIQQDS VPCKIRAKRG CATHPRSIAE RERRTRISEK  300
LRKLQELVPN MDKQTSTADM LDLAVQHIKG LQNQIQNLNQ DRTNCTCSSS KREMF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010275943.11e-105PREDICTED: transcription factor bHLH128-like
TrEMBLA0A0K9P1560.0A0A0K9P156_ZOSMR; Basic helix-loop-helix (BHLH) DNA-binding superfamily
STRINGXP_010275943.11e-104(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP70713752
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.18e-57bHLH family protein