PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc14208.1.g00010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | C2H2 | ||||||||
Protein Properties | Length: 103aa MW: 10905.3 Da PI: 7.5124 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.4 | 0.00023 | 82 | 102 | 1 | 21 |
EEETTTTEEESSHHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHir 21 + C++C + F ++ L H++ Zmw_sc14208.1.g00010.1.am.mk 82 FACHYCRRQFYSSQALGGHQN 102 78***********99988886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 103 aa Download sequence Send to blast |
VGKEGRREKR LIGGGNGHRG QLDAAKVELD LLGGMVGSVV DFRPAAVRDV ADQSSSLPVL 60 LDLVPPDQPP STAAGLDPPQ LFACHYCRRQ FYSSQALGGH QNA |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025799127.1 | 2e-16 | uncharacterized protein LOC112879022 | ||||
TrEMBL | A0A1D6H2L8 | 9e-22 | A0A1D6H2L8_MAIZE; Zinc finger protein 2 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP183 | 36 | 274 |