PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc07906.1.g00030.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

GeBP

Protein Properties

Length: 301aa MW: 32887 Da PI: 6.8148

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc07906.1.g00030.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	97.3	1.5e-30	1	97	5	97
DUF573 5 rlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfske 83 rlw++eDeiv+L+++ +f+a++g+ +++ d++ fye ++++++ ++ksqlveK+rrLK+K++++v++ + g ++sf+++ Zmw_sc07906.1.g00030.1.sm.mk 1 RLWTDEDEIVILRAFAEFTAQRGTafASHQyDTTPFYEDMRGRLQTGFTKSQLVEKLRRLKRKYRNCVDRlRVAGPNFSFRSP 83 89********************9977778***********************************88899**** PP DUF573 84 hdqkifelskkiWg 97 h+q ife+++ iW+ Zmw_sc07906.1.g00030.1.sm.mk 84 HEQAIFEIARTIWR 97 ***********8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	3.0E-28	1	96	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence Send to blast
RLWTDEDEIV ILRAFAEFTA QRGTAFASHQ YDTTPFYEDM RGRLQTGFTK SQLVEKLRRL 60 KRKYRNCVDR LRVAGPNFSF RSPHEQAIFE IARTIWRPAS DKHGRDSDDE GNDDGLAIDA 120 AAAARVNGES AKSPTSRPRR GRRRRAGDFP AGDAAEALPQ APMPAMTTED ALPSFPQPTA 180 MDGTGTVTME QPAAAGLPAM LSAAATVATT TGTAENPILA SLFKEMFRSM LNISSSSATP 240 GLEPPPAIPG LPMDGEKWRQ QRILELEVYL RRIALLQDQA QAALEELRSA PPQYGAGGTN 300 T

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025794014.1	1e-130	probable transcription factor At3g04930
TrEMBL	A0A2T7CC96	1e-128	A0A2T7CC96_9POAL; Uncharacterized protein
TrEMBL	A0A2T8I4R3	1e-128	A0A2T8I4R3_9POAL; Uncharacterized protein
STRING	Sb01g034370.1	1e-126	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP974	37	123