PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc07544.1.g00010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 147aa MW: 16104.6 Da PI: 7.1965 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 28.6 | 3.2e-09 | 117 | 146 | 4 | 33 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLee 33 kr rr+ +NRe+Arr R RK+a+++eLe Zmw_sc07544.1.g00010.1.sm.mk 117 TKRIRRMVSNRESARRTRWRKQAQLAELES 146 69**************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50217 | 8.508 | 116 | 147 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.7E-7 | 117 | 146 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.3E-5 | 118 | 147 | No hit | No description |
SuperFamily | SSF57959 | 2.59E-6 | 118 | 147 | No hit | No description |
CDD | cd14702 | 1.49E-10 | 119 | 147 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 121 | 136 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence Send to blast |
MKNCASELQL EAFIREDAAA GRNEQSCRPL NGGFGFGDQN AMDGSSDENP WWSGSIRTPE 60 PASSSSVEWQ RAVISAASTS GTSSTNHGNE SQSGSNSESL IDVEGVPCER SIKPLKTKRI 120 RRMVSNRESA RRTRWRKQAQ LAELESQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 130 | 137 | RRTRWRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters. {ECO:0000269|PubMed:11133985}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004951741.1 | 7e-31 | bZIP transcription factor RISBZ4 isoform X2 | ||||
Swissprot | Q6H500 | 3e-27 | RSBZ4_ORYSJ; bZIP transcription factor RISBZ4 | ||||
TrEMBL | A0A0E0CGG2 | 3e-31 | A0A0E0CGG2_9ORYZ; Uncharacterized protein | ||||
STRING | OMERI02G06430.2 | 4e-32 | (Oryza meridionalis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP57549 | 2 | 2 |
Publications ? help Back to Top | |||
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